Pairwise Alignments

Query, 644 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 626 a.a., Chemotactic transducer from Pseudomonas fluorescens FW300-N2E2

 Score =  296 bits (757), Expect = 2e-84
 Identities = 172/464 (37%), Positives = 274/464 (59%), Gaps = 9/464 (1%)

Query: 185 GMSKSMDDMVRLLNSFKIEDTGFVFLTNAQGEVQIHRQKEQVKSSLQQIYGSGASALLNK 244
           G   S++ +V+++NS      G  FL +  G+V +   K+QV  +L+ IY  G    + K
Sbjct: 168 GGDLSLETLVKIINSVDFGGIGHAFLVSGDGQVIVSPDKDQVMKNLKDIY-PGTPVRIGK 226

Query: 245 SGFNLISTDYQGEEVMVASIYIESM---DWFLVGTVPVHEVFAELDAVAQRMMLTT-LAV 300
               +   +  G++ +++   +  +   +W++  ++   + +A L       ++   +AV
Sbjct: 227 G---IQDVELNGQDRILSFTPVTGLPNAEWYIGLSIDKAKAYAPLSQFRTSALIAMFVAV 283

Query: 301 AAIFIFMGIFLANSIAMPINQIAKRFTDLGRGDGDLSQRIEVKGNDEIAQLSKGFNGFIE 360
           AAI + + + L   +  P+  + +   D+ +G+GDL++R+ V+G DE A L   FN F+E
Sbjct: 284 AAIALLLSL-LIQVLMRPLTTMGRAMQDIAQGEGDLTRRLVVQGKDEFAVLGGSFNQFVE 342

Query: 361 KIHQSIKDVAQTSRELQVAAEGVSRKALVTHDNSQQQRDQTIQVVTAINQMGATISEIAS 420
           +IH SI +V+  +R++   ++ V   +  +   S +Q  +T  V  AINQ+GA   EIA 
Sbjct: 343 RIHASISEVSSATRQVHDLSQRVMTSSNASLVGSDEQSARTNSVAAAINQLGAATQEIAR 402

Query: 421 NAATAAETANQASGNADQGRNVVNKAKEAISRLAHDIENTGKVVEQLASTTQEIGSILDA 480
           NAA A++ A+ AS  AD GR VV K  +A++ L+  I  +   +E L ++T  IG ILD 
Sbjct: 403 NAADASQHASGASEQADDGRQVVEKTIQAMTELSQKISLSCTQIETLNASTDNIGHILDV 462

Query: 481 IRGISEQTNLLALNAAIEAARAGDQGRGFAVVADEVRNLASRTASSTEEIQKMINQLQND 540
           I+GIS+QTNLLALNAAIEAARAG+ GRGFAVVADEVRNLA RT  S EEI KMI  LQ  
Sbjct: 463 IKGISQQTNLLALNAAIEAARAGEAGRGFAVVADEVRNLAHRTQESAEEIHKMITSLQVG 522

Query: 541 AKNAVSAMDAGKTVTHQGVAASDEAVQVLMSISDRIHDISDRNTQVATATEEQSTVVHTI 600
           ++ AV+ M+A +T + + V  +++A   L+S++ RI +I   N  VA ATEEQ+ VV T+
Sbjct: 523 SREAVTTMNASQTSSEESVEVANQAGLRLVSVTQRIGEIDGMNQSVAAATEEQTAVVETL 582

Query: 601 NQNIEEINAINEVTTSTAEELADASKSLRELSGRLDKLVGNFKL 644
           N ++  IN +N+ + +   E      +L + + RL +LV +FK+
Sbjct: 583 NMDVSHINLLNQQSVANLNETLKDCDALSQQANRLKQLVDSFKI 626