Pairwise Alignments

Query, 644 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 647 a.a., Methyl-accepting chemotaxis protein from Pseudomonas fluorescens FW300-N2E2

 Score =  264 bits (675), Expect = 8e-75
 Identities = 183/650 (28%), Positives = 312/650 (48%), Gaps = 23/650 (3%)

Query: 13  MSIKQKVVLGVTLAVLASTLIVGVMAQRQAREVLEHRLVDL------ELPNILKLIKSDI 66
           M+IKQK+            ++V V+     R+  +   +D       ++ N +K     I
Sbjct: 1   MNIKQKLTWAFAAIACLPVILVAVLVVLNLRDAAKANFLDSSGREIRQIDNGMKQFFDGI 60

Query: 67  DHEVLQLLASAQQIASNEFVQQAIATTERDPATEALLVKQLNNLRDQYRLNDASVANRKT 126
              V       + IA+      A A   + P  E  + +QL ++ +++  +  + A    
Sbjct: 61  SQNVEFFAKDPRVIAAKGLKSYAGADAAQQPFPE--INQQLLDIFERFAKSHPTTAYLSV 118

Query: 127 AYY------WNQNGFLRELNQQQDGWFFGFIGS-GKPTMVSMFQEANGEVKMFANYQLV- 178
                    W  +  +   + +   W+   + + G       +  A  +V +      V 
Sbjct: 119 GMEDGGYASWPDDPKMANYDPRVRPWYKAAMAAPGTNVRTDAYYWAPDDVSLIGTVHTVA 178

Query: 179 --NGNTMS--GMSKSMDDMVRLLNSFKIEDTGFVFLTNAQGEVQIHRQKEQVKSSLQQIY 234
             +G  +   G+  S+  +  L+ + K+ ++G++ L  A G V +       K + + + 
Sbjct: 179 DASGKPIGVVGLDVSLKQLTELVKNIKLGESGYLMLVEANGNVLV--DPADAKHNFKPLA 236

Query: 235 GSGAS-ALLNKSGFNLISTDYQGEEVMVASIYIESMDWFLVGTVPVHEVFAELDAVAQRM 293
             G + A L KS   +   +  G   M   +  + + W  +G +   EV AE  ++   +
Sbjct: 237 DLGPNYAELAKSSDGVTQIEIDGVPYMANVVSSKGLGWRFIGLIKRDEVMAEASSLTWLI 296

Query: 294 MLTTLAVAAIFIFMGIFLANSIAMPINQIAKRFTDLGRGDGDLSQRIEVKGNDEIAQLSK 353
                 +A +F  +G   A+ I  PI  +A    ++  G+GDL++++ V+G DE A L+ 
Sbjct: 297 AAIAAVLAVVFALVGASFASVIVRPIRGVANGLQEIAEGEGDLTRKLTVQGKDETATLAG 356

Query: 354 GFNGFIEKIHQSIKDVAQTSRELQVAAEGVSRKALVTHDNSQQQRDQTIQVVTAINQMGA 413
            FN F+  I Q ++ +   S +LQ AA   S  A   +D + +QR     V TA N+M A
Sbjct: 357 WFNQFLGMIAQLMQRIGSASSDLQTAAADTSHVAQNMNDAAGRQRQAVELVSTAFNEMVA 416

Query: 414 TISEIASNAATAAETANQASGNADQGRNVVNKAKEAISRLAHDIENTGKVVEQLASTTQE 473
           T +E+A + + AA +A++   +   G++ + +A  ++ +L+ D++ + + ++ L   ++ 
Sbjct: 417 TANEVARSCSQAASSADEGYRDVHDGQHHIGEATGSVMKLSDDLQKSTQTMQALEQDSKN 476

Query: 474 IGSILDAIRGISEQTNLLALNAAIEAARAGDQGRGFAVVADEVRNLASRTASSTEEIQKM 533
           I +ILD IR I+EQTNLLALNAAIEAARAGDQGRGFAVVADEVR LA RTA ST EI  +
Sbjct: 477 INTILDTIRSIAEQTNLLALNAAIEAARAGDQGRGFAVVADEVRALARRTADSTGEIDSL 536

Query: 534 INQLQNDAKNAVSAMDAGKTVTHQGVAASDEAVQVLMSISDRIHDISDRNTQVATATEEQ 593
           +  L    +     M +   V+   V    +A      I + +  I D+NTQ+ATA EEQ
Sbjct: 537 LGNLARRTQEVTQQMQSSLQVSQTSVERIQQARDSFDKIRNSVDSIRDQNTQIATAAEEQ 596

Query: 594 STVVHTINQNIEEINAINEVTTSTAEELADASKSLRELSGRLDKLVGNFK 643
             V   IN++I +I+A  ++    A      S  L ++SG+L  LVG F+
Sbjct: 597 HQVAEDINRHIAQIHADAQLVEEFAHSAQTGSGRLTDISGQLKGLVGRFR 646