Pairwise Alignments

Query, 644 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 612 a.a., Methyl-accepting chemotaxis protein from Pseudomonas fluorescens FW300-N2E2

 Score =  233 bits (593), Expect = 2e-65
 Identities = 152/459 (33%), Positives = 241/459 (52%), Gaps = 10/459 (2%)

Query: 189 SMDDMVRLLNSFKIEDTGFVFLTNAQGEVQIHRQKEQVKSSLQQIYGSGAS-ALLNKSGF 247
           S+ ++  L+ S K+ ++G+V L    G V +         S + +   GA+ A L     
Sbjct: 159 SLKNLTELVKSIKLGESGYVMLIE-DGIVLV--DPRDTTHSFKPLKDLGAAYAKLATIPQ 215

Query: 248 NLISTDYQGEEVMVASIYIESMDWFLVGTVPVHEVFAELDAVAQRMMLTTLAVAA---IF 304
                +  G   M        + W  +G +   EV   + A  +   LTTL V     IF
Sbjct: 216 GSTEVELNGIPYMANVWTSPDLGWRYIGLIERSEV---MSAATRMTYLTTLIVGGLTVIF 272

Query: 305 IFMGIFLANSIAMPINQIAKRFTDLGRGDGDLSQRIEVKGNDEIAQLSKGFNGFIEKIHQ 364
             + +  + SI  PI+Q++     + +G+GDL + +E +GNDE A+L+  FN F+  I Q
Sbjct: 273 ALVAVAFSKSIVKPISQVSTGLQSIAQGEGDLRRELEFQGNDETAELAGWFNKFLSAIRQ 332

Query: 365 SIKDVAQTSRELQVAAEGVSRKALVTHDNSQQQRDQTIQVVTAINQMGATISEIASNAAT 424
            I+ +   S  LQ A+   S  A   ++ + +QR+    V TA N+M AT +E+A + + 
Sbjct: 333 LIQHIGAASSNLQNASRVNSEVANNMNEAAGRQREAVELVSTAFNEMVATANEVARSCSG 392

Query: 425 AAETANQASGNADQGRNVVNKAKEAISRLAHDIENTGKVVEQLASTTQEIGSILDAIRGI 484
           AAE+A        +G+  +    + ++RL   +  + + + +L + ++ I  IL  IR I
Sbjct: 393 AAESAENGHRRVAEGKQQIEITTDNVNRLGRRLTESSQSMTELEAGSRSINQILGTIRAI 452

Query: 485 SEQTNLLALNAAIEAARAGDQGRGFAVVADEVRNLASRTASSTEEIQKMINQLQNDAKNA 544
           +EQTNLLALNAAIEAARAGDQGRGFAVVADEVR LA RT+ ST EI++++  L +  +  
Sbjct: 453 AEQTNLLALNAAIEAARAGDQGRGFAVVADEVRALAKRTSDSTGEIEQLLGALGSKTQEV 512

Query: 545 VSAMDAGKTVTHQGVAASDEAVQVLMSISDRIHDISDRNTQVATATEEQSTVVHTINQNI 604
           +  M +   ++H  V++ +        I   +++I D+N Q++ A EEQ +V   IN++I
Sbjct: 513 MGKMGSCLELSHASVSSIESTRDSFEGIQLSVNEIRDQNLQISAAAEEQHSVAEEINRHI 572

Query: 605 EEINAINEVTTSTAEELADASKSLRELSGRLDKLVGNFK 643
           ++I     +  S A    D S  L  LS  L+ LVG FK
Sbjct: 573 QQIYDEARLVESLANSAQDDSGKLSSLSDELNGLVGRFK 611