Pairwise Alignments

Query, 644 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 541 a.a., chemotaxis protein from Pseudomonas fluorescens FW300-N2E3

 Score =  228 bits (581), Expect = 5e-64
 Identities = 130/350 (37%), Positives = 206/350 (58%), Gaps = 2/350 (0%)

Query: 293 MMLTTLAVAAIFIFMGIFLANSIAMPINQIAKRFTDLGRGDGDLSQRIEVKGNDEIAQLS 352
           ++  ++  A + + +   L  SI  P+N+       +    G+L++ IEV G DE A+L 
Sbjct: 192 IIAVSVFAALVTVLLAWLLTRSIVTPLNRAVAAAESIA--GGNLAKPIEVDGKDEPARLL 249

Query: 353 KGFNGFIEKIHQSIKDVAQTSRELQVAAEGVSRKALVTHDNSQQQRDQTIQVVTAINQMG 412
              +     + ++I+ +A ++ +L  AAE +S          QQQ ++  Q  TA+N+M 
Sbjct: 250 GALSTMQANLRKTIEQIAGSANQLGAAAEELSAVTEEASRGLQQQNNEIEQAATAVNEMT 309

Query: 413 ATISEIASNAATAAETANQASGNADQGRNVVNKAKEAISRLAHDIENTGKVVEQLASTTQ 472
           A + E+A NA + +E +NQ++  A +GR+ V +   AI  + HD+++T  ++E LA+  +
Sbjct: 310 AAVEEVARNAVSTSEASNQSTQAAREGRDRVVETVNAIQTMTHDVQSTSLMIEGLATQGR 369

Query: 473 EIGSILDAIRGISEQTNLLALNAAIEAARAGDQGRGFAVVADEVRNLASRTASSTEEIQK 532
           +IG +LD IR I+EQTNLLALNAAIEAARAG+ GRGFAVVADEVR LA RTA ST+EI+K
Sbjct: 370 DIGKVLDVIRAIAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRALAHRTAQSTQEIEK 429

Query: 533 MINQLQNDAKNAVSAMDAGKTVTHQGVAASDEAVQVLMSISDRIHDISDRNTQVATATEE 592
           M+  +QN    AV +M      TH  +  +  A   L  I+  IH I++RN  +A+A+EE
Sbjct: 430 MVAGIQNGTGEAVDSMQQSNQRTHTTLELARAAGVALEQITQSIHQINERNLVIASASEE 489

Query: 593 QSTVVHTINQNIEEINAINEVTTSTAEELADASKSLRELSGRLDKLVGNF 642
           Q+ V   +++N+  I  +   + + A + + AS  L  L+  L+ +V  F
Sbjct: 490 QAQVSREVDRNLVNIRDLATQSAAGANQTSAASHELSRLAVDLNAMVARF 539