Pairwise Alignments

Query, 644 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 629 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

 Score =  277 bits (708), Expect = 1e-78
 Identities = 167/504 (33%), Positives = 277/504 (54%), Gaps = 7/504 (1%)

Query: 146 WFFGFIGSGKPTMVSMFQEA-NGEVKM-FANYQLVNGNTMS--GMSKSMDDMVRLLNSFK 201
           W+   I +G  T+   + +A +GE+ +  A     NG  +   G    +  +V ++N+  
Sbjct: 128 WYKDAIAAGGSTLTEPYVDAASGELVISIATPAQQNGRNIGVVGGDLGLKVLVEIINALD 187

Query: 202 IEDTGFVFLTNAQGEVQIHRQKEQVKSSLQQIYGSGASALLNKSGFNLISTDYQGEEVMV 261
               G  FL +  G++ +H    +V  SL +++     +L   + ++    D Q   +  
Sbjct: 188 FNGMGHAFLVSGDGKILVHPDGSKVMKSLGELFPGHTPSL--DANYSEAELDGQTRILSF 245

Query: 262 ASIY-IESMDWFLVGTVPVHEVFAELDAVAQRMMLTTLAVAAIFIFMGIFLANSIAMPIN 320
           + +  + S+ W++  ++   + +A L +     ++  L    + + +   L   +  P+ 
Sbjct: 246 SRVQGLPSVSWYVGISLDKAKAYAALASFRTSAVVAALTAVGVILLLLGMLMRVLMRPLT 305

Query: 321 QIAKRFTDLGRGDGDLSQRIEVKGNDEIAQLSKGFNGFIEKIHQSIKDVAQTSRELQVAA 380
            + +   ++  G+GDL++R+ V+  DE  +L+  FN F+E+IH SI++V+  ++++   A
Sbjct: 306 DMGRAMANIAEGEGDLTRRLAVQSKDEFGELASAFNRFVERIHTSIREVSSATQQVNEVA 365

Query: 381 EGVSRKALVTHDNSQQQRDQTIQVVTAINQMGATISEIASNAATAAETANQASGNADQGR 440
             V   +  +  NS +Q  +T  V  AIN++GA   EIA NAA A++ A+ A   A+ GR
Sbjct: 366 ARVLAASNSSMANSDEQASRTNSVAAAINELGAAAQEIARNAADASQQASGARHQAEDGR 425

Query: 441 NVVNKAKEAISRLAHDIENTGKVVEQLASTTQEIGSILDAIRGISEQTNLLALNAAIEAA 500
            VV +   A+  L+  I  +   +E L + T +IG IL+ I+GISEQTNLLALNAAIEAA
Sbjct: 426 QVVEQNIAAMRELSAKISASCAQIEALNAKTVDIGQILEVIKGISEQTNLLALNAAIEAA 485

Query: 501 RAGDQGRGFAVVADEVRNLASRTASSTEEIQKMINQLQNDAKNAVSAMDAGKTVTHQGVA 560
           RAG+ GRGFAVVADEVRNLA RT SS +EIQ+MI QLQ  A  +V  M   +  +   V+
Sbjct: 486 RAGEAGRGFAVVADEVRNLAHRTQSSAQEIQQMIEQLQVGAGASVQTMTESQRQSESSVS 545

Query: 561 ASDEAVQVLMSISDRIHDISDRNTQVATATEEQSTVVHTINQNIEEINAINEVTTSTAEE 620
            +D A + L  ++ RI +I   N  VATATEEQ+ V+ ++N +I EIN +N+      + 
Sbjct: 546 IADRAGERLGEVTQRIGEIDGMNQSVATATEEQTAVIESLNMDITEINTLNQQGVENLQS 605

Query: 621 LADASKSLRELSGRLDKLVGNFKL 644
              A   L + + RL +LV +F++
Sbjct: 606 TLRACGDLDQQARRLKQLVDSFRI 629