Pairwise Alignments

Query, 644 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 544 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

 Score =  244 bits (622), Expect = 9e-69
 Identities = 159/495 (32%), Positives = 258/495 (52%), Gaps = 15/495 (3%)

Query: 163 QEANGEVKMFANYQLVNGNTMSGMSKSMDDMVRLL-----NSFKIEDTGFVFLTNAQGEV 217
           + A+G  + +   +L    T +   K+  + +RLL     + + I D G   + +     
Sbjct: 52  EAASGVFEHYRKLELSGAMTTAEAQKAAIEQIRLLRYDGQDYYWINDLGPTMIMHPMQPK 111

Query: 218 QIHRQKEQVKSSLQQIYGSGASALLNKSGFNLISTDYQ----GEEVMVASI-YIESMD-- 270
              +   ++K    +   +    +  + G  L+  DY     GEE  V  I Y++     
Sbjct: 112 LDGQDLSKIKDPEGKELFNEMVRIAQRDGAGLV--DYMWAKPGEENPVPKISYVQLFKPW 169

Query: 271 -WFLVGTVPVHEVFAELDAVAQRMMLTTLAVAAIFIFMGIFLANSIAMPINQIAKRFTDL 329
            W +   + V +V  E      R  L  L ++AI   +   L  SI  P+        ++
Sbjct: 170 GWIIGSGIYVDDVEQEFWNYLTRFSLIGLLISAIMAVLVAILIRSIVRPLRHTMAAMANI 229

Query: 330 GRGDGDLSQRIEVKGNDEIAQLSKGFNGFIEKIHQSIKDVAQTSRELQVAAEGVSRKALV 389
             G+ DL++ ++V GNDE+  L + FN F +K+   +  + +T+  L  ++  +S+ +  
Sbjct: 230 ASGEADLTRTLDVSGNDELTTLGRDFNRFTQKLRTVVGQLFETAGALDQSSRSLSQLSGQ 289

Query: 390 THDNSQQQRDQTIQVVTAINQMGATISEIASNAATAAETANQASGNADQGRNVVNKAKEA 449
            H+ SQQQ  Q  QV TAIN++   + E+A NA  A+     A   A QG+  +  + + 
Sbjct: 290 AHEQSQQQMLQMEQVATAINEVTYAVQEVAKNAEHASSEVGSAENQAGQGQRNIETSLQQ 349

Query: 450 ISRLAHDIENTGKVVEQLASTTQEIGSILDAIRGISEQTNLLALNAAIEAARAGDQGRGF 509
           I  L+  I     V++ LA  T +IGS+L+ I  I+EQTNLLALNAAIEAARAG+QGRGF
Sbjct: 350 IDELSATIGQAVDVIQSLADETTKIGSVLEVIGSIAEQTNLLALNAAIEAARAGEQGRGF 409

Query: 510 AVVADEVRNLASRTASSTEEIQKMINQLQNDAKNAVSAMDAGKTVTHQGVAASDEAVQVL 569
           AVVADEVR LA RT  ST EI  MI +LQ ++  AV+ +      +   V  + +A + L
Sbjct: 410 AVVADEVRLLAQRTQQSTAEIHGMIERLQKNSGAAVNVIMESNRASQLTVEQASQAGESL 469

Query: 570 MSISDRIHDISDRNTQVATATEEQSTVVHTINQNIEEINAINEVTTSTAEELADASKSLR 629
             I+  + ++S  N  +A+AT +QS VV  INQN+ +   + + +T  AE+ ++A K L 
Sbjct: 470 GEIAQALRNLSGLNASIASATLQQSHVVEDINQNVTQAAGLAQESTLAAEQSSEAGKQLG 529

Query: 630 ELSGRLDKLVGNFKL 644
           EL+G+L++L+  F++
Sbjct: 530 ELAGQLNRLLSQFRV 544