Pairwise Alignments

Query, 644 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 629 a.a., Histidine kinase, HAMP region:Cache:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  293 bits (749), Expect = 2e-83
 Identities = 175/507 (34%), Positives = 289/507 (57%), Gaps = 13/507 (2%)

Query: 146 WFFGFIGSGKPTMVSMFQEANGEVKMFANYQLVNGNT----MSGMSKSMDDMVRLLNSFK 201
           W+   + +GK  +   + +A  +  +      + G++    + G   S++ +V++++S +
Sbjct: 128 WYVDALRAGKTILTEPYLDAVTKGLVVTLATPIKGDSGVSGVIGGDLSLEILVKMISSLR 187

Query: 202 IEDTGFVFLTNAQGEVQIHRQKEQVKSSLQQIYGSGASALLNKSGFNLISTDYQGEEVMV 261
           +   G+ FL +A G + +H     V  +L ++Y +    L      +L  ++Y G+  ++
Sbjct: 188 MHGDGYAFLVDANGRILVHPDTSLVMKTLAEVYPANTPRLSQ----DLSESEYAGKTQIL 243

Query: 262 ASIYIE---SMDWFLVGTVPVHEVFAELDAVAQRMMLTT-LAVAAIFIFMGIFLANSIAM 317
              +++   S++W++   +     +A L       ++ T +AV  I + +G+ L+  +  
Sbjct: 244 TFAHVDGLPSVNWYVGVAMDKDIAYAALGEFRNSAIVATVIAVVLIILLLGMLLS-VLLR 302

Query: 318 PINQIAKRFTDLGRGDGDLSQRIEVKGNDEIAQLSKGFNGFIEKIHQSIKDVAQTSRELQ 377
           P+N + +   D+  G+GDL++R+ ++  DE   L  GFN F+E+IH S+++VA ++ +L 
Sbjct: 303 PLNLMGRAMHDIAAGEGDLTKRLVIESQDEFGHLGNGFNLFVERIHDSMREVASSTVQLN 362

Query: 378 VAAEGVSRKALVTHDNSQQQRDQTIQVVTAINQMGATISEIASNAATAAETANQASGNAD 437
             A  V   +  +  NS QQ  +T  V  AIN++GA   EIA NAA A+  ++ A   A 
Sbjct: 363 EVALRVLNASNSSMLNSDQQSHRTNSVAAAINELGAATQEIAQNAARASGHSSDARTLAS 422

Query: 438 QGRNVVNKAKEAISRLAHDIENTGKVVEQLASTTQEIGSILDAIRGISEQTNLLALNAAI 497
            G++VV +  EA+SRL+  I +    +E L + T  IG ILD I GIS+QTNLLALNAAI
Sbjct: 423 DGQDVVGQNIEAMSRLSKRISSASGQIETLNTKTANIGQILDVITGISQQTNLLALNAAI 482

Query: 498 EAARAGDQGRGFAVVADEVRNLASRTASSTEEIQKMINQLQNDAKNAVSAMDAGKTVTHQ 557
           EAARAG+ GRGFAVVADEVR+LA RT  S  ++Q+MI QLQ+ A+ AVS M+  +  + +
Sbjct: 483 EAARAGEAGRGFAVVADEVRSLAHRTQESASQVQEMIEQLQSGAREAVSIMNDSQRESVE 542

Query: 558 GVAASDEAVQVLMSISDRIHDISDRNTQVATATEEQSTVVHTINQNIEEINAINEVTTST 617
            V  +++AV  L  +++RI +I   N  VA ATEEQ+ VV  IN +I EIN +N+     
Sbjct: 543 TVGIANKAVASLEHVTERIGEIDGMNQSVAAATEEQTAVVEAINVDITEINTLNQQGVEN 602

Query: 618 AEELADASKSLRELSGRLDKLVGNFKL 644
                 A   L + S RL +LVG+F++
Sbjct: 603 LNATLRACTDLEQQSTRLTQLVGSFRI 629