Pairwise Alignments

Query, 644 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 653 a.a., methyl-accepting chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  238 bits (606), Expect = 8e-67
 Identities = 152/436 (34%), Positives = 237/436 (54%), Gaps = 31/436 (7%)

Query: 228 SSLQQIYGSGASALLNKSGFNLISTDYQGEEVMVASIYIESMDWFLVGTVPVH---EVFA 284
           + + Q  GS   A L + GF+    D          + ++  DWF + T  +     V A
Sbjct: 229 NDVMQQPGSLEVARLQRLGFDTPMGD---------PLNVKPEDWFNLSTARIDMMANVEA 279

Query: 285 ELD-----------AVAQRMMLTTLAVAAIFIFMGIFLANSIAMPINQIAKRFTDLGR-- 331
           EL            + AQ  +   +A+  + + + ++LA+ I   I  I     D+ R  
Sbjct: 280 ELGQNVVGLATDARSSAQSSLYVAVAIVVLMLIVVLWLASVI---IRNIKVAVVDVNRTL 336

Query: 332 ---GDGDLSQRIEVKGNDEIAQLSKGFNGFIEKIHQSIKDVAQTSRELQVAAEGVSRKAL 388
                 DL+ R    G DE  ++S+  +    +I + I ++   + ++  AAE  S  AL
Sbjct: 337 MALSTRDLTARTRYIGKDEFGEISRNLDNMAHQISEVISEIGSATAQVATAAEQSSAVAL 396

Query: 389 VTHDNSQQQRDQTIQVVTAINQMGATISEIASNAATAAETANQASGNADQGRNVVNKAKE 448
            T+ N  QQR  T QV TAI++M AT+ ++A +   AAE + + + +  QG+  ++    
Sbjct: 397 QTNQNVAQQRQGTDQVATAISEMSATVKDVARSTTDAAEMSQRVNSSTVQGKTEIDNTIG 456

Query: 449 AISRLAHDIENTGKVVEQLASTTQEIGSILDAIRGISEQTNLLALNAAIEAARAGDQGRG 508
            I  L+   E T +++++L   +  I S+LD IRG+++QTNLLALNAAIEAARAG+QGRG
Sbjct: 457 LIQELSVQAEETSRIIDELKGESNSISSVLDVIRGVADQTNLLALNAAIEAARAGEQGRG 516

Query: 509 FAVVADEVRNLASRTASSTEEIQKMINQLQNDAKNAVSAMDAGKTVTHQGVAASDEAVQV 568
           FAVVADEVRNLA +T  ST  IQKMI  LQ+ ++ A ++M        +G +    A ++
Sbjct: 517 FAVVADEVRNLAKKTQDSTVSIQKMIANLQSGSERAAASMQETLGKAQEGASNVVRAGEL 576

Query: 569 LMSISDRIHDISDRNTQVATATEEQSTVVHTINQNIEEINAINEVTTSTAEELADASKSL 628
           L  I++ I  ISDRN QVA+A EEQS V   I++N+++IN++    ++ AE+ A  S+ L
Sbjct: 577 LEEIAEGIATISDRNIQVASAAEEQSLVAEEIHRNVDDINSLVIQVSAGAEQTAVTSREL 636

Query: 629 RELSGRLDKLVGNFKL 644
             L+ +   LVG FK+
Sbjct: 637 ARLAEQQQGLVGRFKV 652