Pairwise Alignments

Query, 644 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 646 a.a., Histidine kinase, HAMP region:Cache:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  251 bits (640), Expect = 9e-71
 Identities = 157/497 (31%), Positives = 255/497 (51%), Gaps = 8/497 (1%)

Query: 153 SGKPTMVSMFQEANGEVKMFANYQLV-----NGNTMSGMSKSMDDMVRLLNSFKIEDTGF 207
           +GK      +  AN +  + +  + +     N   +  +  S+  +  ++   K+ ++G+
Sbjct: 151 AGKTVRSDAYYWANDDAVLVSTIRAIPNKLGNPGGVVNIDVSLKQLTNIVKQIKLGESGY 210

Query: 208 VFLTNAQGEVQIH-RQKEQVKSSLQQIYGSGASALLNKSGFNLISTDYQGEEVMVASIYI 266
           + L    G V +  +Q E     L ++ G G S L  K+   L+     GE  M      
Sbjct: 211 LMLMEKNGTVLVDPKQPEHNFKKLGEL-GDGFSELA-KTASGLVEVTLNGERYMANVYSS 268

Query: 267 ESMDWFLVGTVPVHEVFAELDAVAQRMMLTTLAVAAIFIFMGIFLANSIAMPINQIAKRF 326
           E + W  +G +   EV A    +   + +    +A +F  +G   A  I  PI+ ++   
Sbjct: 269 EQLGWNFIGLIKQDEVMASATRLTWLIGIIAAVLAVVFAIVGASFARVIVRPIHSVSSGL 328

Query: 327 TDLGRGDGDLSQRIEVKGNDEIAQLSKGFNGFIEKIHQSIKDVAQTSRELQVAAEGVSRK 386
             +  G+GDL+Q + V+G DE AQL+  FN F+  I   I+ + Q + ++  A+   +R 
Sbjct: 329 EGIAGGEGDLTQNLAVRGKDETAQLAGWFNKFLTAIRSLIQHIGQAAGKILEASHSSTRV 388

Query: 387 ALVTHDNSQQQRDQTIQVVTAINQMGATISEIASNAATAAETANQASGNADQGRNVVNKA 446
           +    + + +QR+    V TA ++M AT +E+A + + AA++A+     A +G+  ++ A
Sbjct: 389 SNDMAEAAGRQREAVDMVSTAFHEMVATSNEVARSCSQAADSADNGQQQAREGQRQIDDA 448

Query: 447 KEAISRLAHDIENTGKVVEQLASTTQEIGSILDAIRGISEQTNLLALNAAIEAARAGDQG 506
             ++ +L+ ++  + K + QL   +  I SIL+ IR I+EQTNLLALNAAIEAARAG+QG
Sbjct: 449 VRSVDQLSEELTRSAKDMTQLEKDSAGIQSILNTIRSIAEQTNLLALNAAIEAARAGEQG 508

Query: 507 RGFAVVADEVRNLASRTASSTEEIQKMINQLQNDAKNAVSAMDAGKTVTHQGVAASDEAV 566
           RGFAVVADEVR LA RT+ ST EI  ++  L     +    M A   V+ Q V    +A 
Sbjct: 509 RGFAVVADEVRALAKRTSDSTAEIDSLLGNLAKRTASVAQQMHASLDVSQQSVTKIGQAR 568

Query: 567 QVLMSISDRIHDISDRNTQVATATEEQSTVVHTINQNIEEINAINEVTTSTAEELADASK 626
                I + +  I D NTQ+ATA EEQ  V   IN++I +I+   ++    ++     S+
Sbjct: 569 SSFGQIRESVDVIRDMNTQIATAAEEQHQVAEDINRHISQIHGDAQLIAQLSDSARADSR 628

Query: 627 SLRELSGRLDKLVGNFK 643
           SL  LS  LD LV  FK
Sbjct: 629 SLEMLSSELDGLVRKFK 645