Pairwise Alignments

Query, 644 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 626 a.a., Histidine kinase, HAMP region:Cache:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  296 bits (758), Expect = 2e-84
 Identities = 172/509 (33%), Positives = 288/509 (56%), Gaps = 10/509 (1%)

Query: 142 QQDGWFFGFIGSGKPTMVSMFQEANGEVKMFANYQLVNGNTMSGM---SKSMDDMVRLLN 198
           +Q  W+   + +GK  + + +  + G + +     +     ++G+     S+D +V+++N
Sbjct: 122 RQRPWYKSTVDAGKTILSAPYLASVGGLVVTIASPVKAAGQVTGVVGGDLSLDTLVKIIN 181

Query: 199 SFKIEDTGFVFLTNAQGEVQIHRQKEQVKSSLQQIYGSGASALLNKSGFNLISTDYQGEE 258
           S +    G+ FL +  G++ +   KEQV  +L+ IY     +L       L      G++
Sbjct: 182 SVEFGGLGYAFLVSGDGQIIVSPDKEQVMKNLKDIYPGQTISL----DARLREVTLNGQQ 237

Query: 259 VMVASIYIE---SMDWFLVGTVPVHEVFAELDAVAQRMMLTTLAVAAIFIFMGIFLANSI 315
            +++   I    S DW++  ++   + +A L       M+  L   A+   +   L  ++
Sbjct: 238 RLLSFTPITGLPSADWYIGLSIDKDKAYAPLSQFRSSAMVAVLIAVAVIALLLSLLIRAL 297

Query: 316 AMPINQIAKRFTDLGRGDGDLSQRIEVKGNDEIAQLSKGFNGFIEKIHQSIKDVAQTSRE 375
             P+  + +   D+ +G+GDL++R+ ++G DE A L   FN F+E++H SI +V+  + +
Sbjct: 298 MRPLTDMGRAMQDIAQGEGDLTRRLSIQGKDEFAALGGSFNQFVERVHASIVEVSSATLQ 357

Query: 376 LQVAAEGVSRKALVTHDNSQQQRDQTIQVVTAINQMGATISEIASNAATAAETANQASGN 435
           +   ++ V   +  +     +Q  +T  V  AIN++GA   EIA NA+ A+  A++A   
Sbjct: 358 VHDLSQRVVNSSNSSIVGFDEQSARTNNVAAAINELGAATQEIARNASDASIQASEARNQ 417

Query: 436 ADQGRNVVNKAKEAISRLAHDIENTGKVVEQLASTTQEIGSILDAIRGISEQTNLLALNA 495
           A+ G+ VV K   A+S L+  I ++   +EQL ++T+ IG ILD I+GIS+QTNLLALNA
Sbjct: 418 AEDGQVVVEKTIHAMSALSAKISDSCTQIEQLNASTENIGHILDVIKGISQQTNLLALNA 477

Query: 496 AIEAARAGDQGRGFAVVADEVRNLASRTASSTEEIQKMINQLQNDAKNAVSAMDAGKTVT 555
           AIEAARAG+ GRGFAVVADEVRNLA RT +S +EI KMI  LQ+ +++AV  M+  +T +
Sbjct: 478 AIEAARAGEAGRGFAVVADEVRNLAHRTQTSADEIHKMIGSLQSGSQHAVLNMNESQTSS 537

Query: 556 HQGVAASDEAVQVLMSISDRIHDISDRNTQVATATEEQSTVVHTINQNIEEINAINEVTT 615
            + V  +++A   L  ++ RI DI   N  VA ATEEQ+ VV T+N +I +IN +N+   
Sbjct: 538 QESVEVANQAGSRLRDVTRRIGDIDGMNQSVAAATEEQTAVVETLNIDINQINTLNQQGV 597

Query: 616 STAEELADASKSLRELSGRLDKLVGNFKL 644
           +   E      +L + +GRL +LV +FK+
Sbjct: 598 ANLNETLKDCAALSQQAGRLKQLVDSFKI 626