Pairwise Alignments

Query, 644 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 546 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  223 bits (568), Expect = 2e-62
 Identities = 135/359 (37%), Positives = 213/359 (59%), Gaps = 9/359 (2%)

Query: 290 AQRMMLTTLAVAAIFIF-MGIFLANSIAMPINQIAKRFTDLGRGDGDLSQRIEVKGNDEI 348
           AQR +   + ++    F MG+F++ +I+ PIN        +    GDL+  I  + +DE 
Sbjct: 193 AQRNLYIGIGLSFFAAFVMGLFISRAISTPINTAVTNARRIA--SGDLTLPIASQYHDEA 250

Query: 349 AQLSKGFNGFIEKIHQSIKDVAQTSRELQVAAEGVSRKALVTHDNSQ---QQRDQTIQVV 405
             +    +   + +  +I  ++  + +L  AAE ++    VT ++S+   +Q D+  Q  
Sbjct: 251 GMMLVALSDMQDNLKSTIGQISSAADQLASAAEELNA---VTEESSRGLIRQNDEIQQAA 307

Query: 406 TAINQMGATISEIASNAATAAETANQASGNADQGRNVVNKAKEAISRLAHDIENTGKVVE 465
           +A+N+M A + E+A NA + +E + Q S +A  GR+    A  AI+ ++ +I ++  +VE
Sbjct: 308 SAVNEMTAAVEEVARNAMSTSEASRQTSTDAAAGRDQARDAVNAINTVSAEISSSTTMVE 367

Query: 466 QLASTTQEIGSILDAIRGISEQTNLLALNAAIEAARAGDQGRGFAVVADEVRNLASRTAS 525
           +LA   +EIG +LD IRGI+EQTNLLALNAAIEAARAG+QGRGFAVVADEVR LA+RT +
Sbjct: 368 ELAGRVREIGQVLDVIRGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALAARTQA 427

Query: 526 STEEIQKMINQLQNDAKNAVSAMDAGKTVTHQGVAASDEAVQVLMSISDRIHDISDRNTQ 585
           ST EI+ MI  +Q  A  AV AM   +T+T      +    Q L  I+  + +I+DRN  
Sbjct: 428 STGEIETMIGSVQASADQAVRAMANSRTLTSNTQTLAQATGQSLERIAQSVAEINDRNML 487

Query: 586 VATATEEQSTVVHTINQNIEEINAINEVTTSTAEELADASKSLRELSGRLDKLVGNFKL 644
           +ATA+EEQS V   +++N+  I  ++  T + A + + +S+ L  L+   + LVG FK+
Sbjct: 488 IATASEEQSHVAREVDRNLVNIQDLSAQTAAGAHQTSASSQELSRLAISFNNLVGKFKV 546