Pairwise Alignments

Query, 644 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 636 a.a., putative methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella amazonensis SB2B

 Score =  600 bits (1546), Expect = e-176
 Identities = 314/636 (49%), Positives = 460/636 (72%), Gaps = 3/636 (0%)

Query: 10  LHQMSIKQKVVLGVTLAVLASTLIVGVMAQRQAREVLEHRLVDLELPNILKLIKSDIDHE 69
           L+ ++IKQK++L V+LAV+ ST+ VG++ Q  AR+V+E R++  E+P  +  I+++++ +
Sbjct: 3   LNMLTIKQKILLTVSLAVILSTVAVGLLGQHSARDVVEQRMLGSEMPAKMLSIRNELEKD 62

Query: 70  VLQLLASAQQIASNEFVQQAIATTERDPATEALLVKQLNNLRDQYRLNDASVANRKTAYY 129
           ++ LL +A+Q+A +  + + +    R    E+ +V QL ++  QY+L  AS A+R+T  Y
Sbjct: 63  MVSLLNAAKQLADSRMLGKWLEQG-RPAEDESRVVSQLQDVASQYQLAQASYADRETGAY 121

Query: 130 WNQNGFLRELNQQQDGWFFGFIGSGKPTMVSMFQEANGEVKMFANYQLVNGNTMSGMSKS 189
           + Q+GFLR L  +QDGWFF +  SG    +++F EANG+VK+F NYQ +NG  ++G++KS
Sbjct: 122 YTQSGFLRILTPEQDGWFFDYRSSGVQQRLNVFTEANGDVKLFINYQQLNGRGLAGLAKS 181

Query: 190 MDDMVRLLNSFKIEDTGFVFLTNAQGEVQIHRQKEQV-KSSLQQIYGSGASALLNKSGFN 248
           +D MV+ L SFK+E++GFV+L +A+GEVQ+H    ++ K++L  +YG   S LL+++ FN
Sbjct: 182 LDAMVQRLTSFKLEESGFVYLVDAKGEVQLHSDPGKIRKATLNSLYGKSGS-LLSRADFN 240

Query: 249 LISTDYQGEEVMVASIYIESMDWFLVGTVPVHEVFAELDAVAQRMMLTTLAVAAIFIFMG 308
            +  +  G+ +MVAS Y+ S+DW+LV  VP  EVFA LD  A +++ +TL +A  F+ + 
Sbjct: 241 YMEVEVDGQPMMVASSYLPSIDWYLVAQVPEAEVFALLDEAALKILFSTLLIALAFVVLS 300

Query: 309 IFLANSIAMPINQIAKRFTDLGRGDGDLSQRIEVKGNDEIAQLSKGFNGFIEKIHQSIKD 368
            F+A+S++ PI  +A+ F D+G G+GDL QR+ V+G DE+AQL+ GFN FI KI  S+ +
Sbjct: 301 GFVASSVSKPIAAVARMFRDIGEGEGDLRQRLPVQGEDELAQLASGFNSFISKIQDSVIE 360

Query: 369 VAQTSRELQVAAEGVSRKALVTHDNSQQQRDQTIQVVTAINQMGATISEIASNAATAAET 428
           VAQTS +L  +A  VSR+A  T ++SQ Q+D+T+QVVTAIN+MGAT++EIA+NAA AAE 
Sbjct: 361 VAQTSEQLGKSAIDVSRQAQQTLEDSQDQKDRTMQVVTAINEMGATVNEIAANAAQAAEA 420

Query: 429 ANQASGNADQGRNVVNKAKEAISRLAHDIENTGKVVEQLASTTQEIGSILDAIRGISEQT 488
           A  A   +  G+ VV +A++ I++L+ D+   G+V+E LA+ T+ IGSILD IR ISEQT
Sbjct: 421 AKDADRASGSGQKVVTQARDTINQLSKDVSQVGEVIESLATHTKSIGSILDVIRAISEQT 480

Query: 489 NLLALNAAIEAARAGDQGRGFAVVADEVRNLASRTASSTEEIQKMINQLQNDAKNAVSAM 548
           NLLALNAAIEAARAG+ GRGFAVVADEVRNLASRTA+ST+E+Q MI++LQ+++  AV+AM
Sbjct: 481 NLLALNAAIEAARAGEAGRGFAVVADEVRNLASRTAASTDEVQVMIDKLQSESARAVNAM 540

Query: 549 DAGKTVTHQGVAASDEAVQVLMSISDRIHDISDRNTQVATATEEQSTVVHTINQNIEEIN 608
              ++ + +GV+A DEA   L  ISD+I  ISD N QVA ATEEQSTVV  IN+N+ EIN
Sbjct: 541 SQSRSRSQEGVSAVDEASNTLSGISDQIGLISDMNIQVAAATEEQSTVVEDINRNVTEIN 600

Query: 609 AINEVTTSTAEELADASKSLRELSGRLDKLVGNFKL 644
            I + T +TA+  A ASK L  L+ RLD+LV  FK+
Sbjct: 601 DITQRTAATAQAAARASKDLNALATRLDQLVARFKV 636