Pairwise Alignments

Query, 644 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 673 a.a., putative methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella amazonensis SB2B

 Score =  226 bits (576), Expect = 3e-63
 Identities = 134/356 (37%), Positives = 198/356 (55%), Gaps = 10/356 (2%)

Query: 295 LTTLAVAAIFIFMGIFLANSIAMPINQIAKRFTDLGRG------DGDLSQRIEVKGNDEI 348
           L TL +  I I + + ++ ++  P+    KR  D   G       GDL+ +++  G+DE 
Sbjct: 322 LRTLILVVIAIVVAVVISFAVVRPL----KRSLDEVNGALNVLASGDLTHKLDDTGHDEF 377

Query: 349 AQLSKGFNGFIEKIHQSIKDVAQTSRELQVAAEGVSRKALVTHDNSQQQRDQTIQVVTAI 408
           A+LS+  N  ++ +   I  +   S +L  AAE  S     T    Q+Q+ Q  QV TA 
Sbjct: 378 AELSRNCNRLVDSLRSLIASILDRSNQLAAAAEETSAITSQTTIGIQEQKSQVDQVATAT 437

Query: 409 NQMGATISEIASNAATAAETANQASGNADQGRNVVNKAKEAISRLAHDIENTGKVVEQLA 468
            ++ ++  ++  +A  A     QA       R + ++ K  I  LA ++    KV+ ++ 
Sbjct: 438 TELSSSAHQVNMSADDALSQIKQADEETQHMRTIADENKRTILSLADEVAKASKVINKVH 497

Query: 469 STTQEIGSILDAIRGISEQTNLLALNAAIEAARAGDQGRGFAVVADEVRNLASRTASSTE 528
           S +  IGSILD IRGI+EQTNLLALNAAIEAARAG+QGRGFAVVADEVR+LASRT  ST 
Sbjct: 498 SDSASIGSILDVIRGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLASRTQDSTR 557

Query: 529 EIQKMINQLQNDAKNAVSAMDAGKTVTHQGVAASDEAVQVLMSISDRIHDISDRNTQVAT 588
           EIQ+MI  LQ   + AV+ M  G+      V  +++A Q L +IS  +H   D  T +A 
Sbjct: 558 EIQQMIEVLQQGTQQAVAVMQLGQNQAQSCVEKTEQANQALQTISHSVHKAYDAGTHIAQ 617

Query: 589 ATEEQSTVVHTINQNIEEINAINEVTTSTAEELADASKSLRELSGRLDKLVGNFKL 644
           A +EQ+ V   +++ +E I AI+E T   AE+ A +S  +  L+  L   V  F++
Sbjct: 618 AAQEQNLVSQQVSEKLEHIAAISEETALGAEQTAKSSHEVARLAEELQSSVKEFRV 673