Pairwise Alignments

Query, 644 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 621 a.a., putative methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella amazonensis SB2B

 Score =  238 bits (608), Expect = 5e-67
 Identities = 149/368 (40%), Positives = 213/368 (57%), Gaps = 5/368 (1%)

Query: 279 VHEVFAEL-DAVAQRMMLTTLAVAAIFIFMGIFLA-NSIAMPINQIAKRFTDLGRGDGDL 336
           +HE+  E  D+VA  M  T  AV A+ + +  F+   +I  PIN I +  + +G+ D +L
Sbjct: 256 LHEIHDEEGDSVA--MATTLFAVIAVLVAIVTFMIIRAIITPINNINQVISHVGK-DKNL 312

Query: 337 SQRIEVKGNDEIAQLSKGFNGFIEKIHQSIKDVAQTSRELQVAAEGVSRKALVTHDNSQQ 396
           + R + +G DEIA++ + FN  +E     I+ V      +  + + +S  A    D   +
Sbjct: 313 TLRCDTQGGDEIAEIGQHFNEMVESFRALIQQVNDAVNVMNESCQELSANATQASDGVLR 372

Query: 397 QRDQTIQVVTAINQMGATISEIASNAATAAETANQASGNADQGRNVVNKAKEAISRLAHD 456
           Q ++T  V TAI +MGATI EIA N   AAE AN    NA  G+  V +  E I  LA  
Sbjct: 373 QLNETDMVATAITEMGATIDEIAKNTELAAERANHTHTNAQVGQQSVEQTIEKIQSLAQQ 432

Query: 457 IENTGKVVEQLASTTQEIGSILDAIRGISEQTNLLALNAAIEAARAGDQGRGFAVVADEV 516
           + N+  VV +L   +  IGS+LD IRGI+EQTNLLALNAAIEAARAG+QGRGFAVVADEV
Sbjct: 433 LNNSASVVAELERDSGTIGSVLDVIRGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEV 492

Query: 517 RNLASRTASSTEEIQKMINQLQNDAKNAVSAMDAGKTVTHQGVAASDEAVQVLMSISDRI 576
           R+LA RT  STEEI  +I  LQ+  ++ V  M+A +    +    +  A  +L  I+  +
Sbjct: 493 RSLAMRTQESTEEIAGIIQTLQSRTRSIVQLMEASQRQGGESAEQAASAGTMLAQINQDV 552

Query: 577 HDISDRNTQVATATEEQSTVVHTINQNIEEINAINEVTTSTAEELADASKSLRELSGRLD 636
            +I D +TQ+A A EEQS+V   +N+N+  I  I E ++  A   A AS  +RE +  L 
Sbjct: 553 TNIMDMSTQIAAAIEEQSSVAAEVNKNVVVIRDIAEESSHAAMANAKASDDVRERAEYLQ 612

Query: 637 KLVGNFKL 644
           + V  F++
Sbjct: 613 RAVSQFRV 620