Pairwise Alignments

Query, 644 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 541 a.a., putative methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella amazonensis SB2B

 Score =  238 bits (607), Expect = 5e-67
 Identities = 133/349 (38%), Positives = 214/349 (61%), Gaps = 3/349 (0%)

Query: 298 LAVAAIFI--FMGIFLANSIAMPINQIAKRFTDLGRGDGDLSQRIEVKGNDEIAQLSKGF 355
           LAV A+ I  F G+++   +  P+ +I ++   + R   D++    V  +DE+  ++K  
Sbjct: 194 LAVFAVLITSFFGVWVNRGVMTPVTEIRQKLRQI-REKSDMTVSFTVFRDDELGHIAKDL 252

Query: 356 NGFIEKIHQSIKDVAQTSRELQVAAEGVSRKALVTHDNSQQQRDQTIQVVTAINQMGATI 415
           NG +  +   +K++A+ +  L  +A+ ++      +D   +Q+ +T Q  TA+N+M A +
Sbjct: 253 NGVVNHLKGILKNIAEAASTLGDSADELNEFTRQANDRMFKQQSETEQTATAMNEMTAAV 312

Query: 416 SEIASNAATAAETANQASGNADQGRNVVNKAKEAISRLAHDIENTGKVVEQLASTTQEIG 475
           +E+A ++ +AAE+A  A  +A +G ++V ++  ++S LA  I+ T  V+ +LA+ +Q IG
Sbjct: 313 AEVAQSSNSAAESARNADESAARGNSIVQQSISSMSVLASQIQGTAAVIGELATESQNIG 372

Query: 476 SILDAIRGISEQTNLLALNAAIEAARAGDQGRGFAVVADEVRNLASRTASSTEEIQKMIN 535
            +LD I+ I+EQTNLLALNAAIEAARAG+QGRGFAVVADEVR LA RT+ ST EI+ MI 
Sbjct: 373 RVLDVIKSIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLAQRTSESTREIESMIE 432

Query: 536 QLQNDAKNAVSAMDAGKTVTHQGVAASDEAVQVLMSISDRIHDISDRNTQVATATEEQST 595
            LQ   K+AV++M+ G         +++ A   L  I   +  I+  NT +ATA +EQS 
Sbjct: 433 SLQQGVKSAVNSMEQGIAQVDNANESTNAAGSALQDIVASVDSITQLNTHIATAADEQSC 492

Query: 596 VVHTINQNIEEINAINEVTTSTAEELADASKSLRELSGRLDKLVGNFKL 644
           V  +INQ+I  I+ I + +T  A +L++A   L +L+G +   VG F L
Sbjct: 493 VAESINQSIIAISDIAQESTQAANDLSEAVHQLAQLAGHMRTQVGTFIL 541