Pairwise Alignments

Query, 644 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 649 a.a., putative methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella amazonensis SB2B

 Score =  236 bits (602), Expect = 2e-66
 Identities = 133/354 (37%), Positives = 211/354 (59%), Gaps = 5/354 (1%)

Query: 293 MMLTTLAVAAIFIFMGIFLANSIAMPINQIAKRFTDLGR--GDGDLSQRIEVKGNDEIAQ 350
           +++  +A   + I++ I +  +I  P+    +    + R    G+L Q    +G+  I  
Sbjct: 299 VVVVAIAAMLMAIWLAITVVRAIRRPVGGEPREIASIAREIAGGNLGQNFLREGSTGIYA 358

Query: 351 LSKGFNGFIEKIHQSIKDVAQTSRELQVAAEGVSRKALVTHDNSQQQRDQTIQVVTAINQ 410
                N  + +I   + D ++T  +      GV+ ++     NS+ Q DQ     +A+ +
Sbjct: 359 AMAEMNDNLRRIVSELNDASRTLGDSSSGMLGVTEES---RKNSESQADQLAHTASAMQE 415

Query: 411 MGATISEIASNAATAAETANQASGNADQGRNVVNKAKEAISRLAHDIENTGKVVEQLAST 470
           M  T+ +IA NA  A+E A++A  +A +G  VV   + +I  L  +I +   ++E L   
Sbjct: 416 MTHTVDDIARNAQRASEMASEADHHAQEGMGVVEDTRRSIMVLVDNITDVSGIIENLEKE 475

Query: 471 TQEIGSILDAIRGISEQTNLLALNAAIEAARAGDQGRGFAVVADEVRNLASRTASSTEEI 530
           T+ +GSILD IRGI+EQTNLLALNAAIEAARAG+QGRGFAVVADEVRNLASRT +STEEI
Sbjct: 476 TENVGSILDVIRGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLASRTQNSTEEI 535

Query: 531 QKMINQLQNDAKNAVSAMDAGKTVTHQGVAASDEAVQVLMSISDRIHDISDRNTQVATAT 590
           Q +I +LQ +++ +V +M    T   Q    +++A+  L +I+D +  I D N Q+A A 
Sbjct: 536 QALIGRLQAESRRSVESMRVNVTEATQTSEKANKAIAALGAIADSVMAIRDMNHQIAVAA 595

Query: 591 EEQSTVVHTINQNIEEINAINEVTTSTAEELADASKSLRELSGRLDKLVGNFKL 644
           EEQ+TVV TIN ++EEI+ +  +  + +E++ +++  + E+S +L  +VG FKL
Sbjct: 596 EEQATVVGTINVSVEEISGLARMNAAGSEQVQNSANGISEISSKLSGIVGRFKL 649