Pairwise Alignments

Query, 644 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 554 a.a., putative methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella amazonensis SB2B

 Score =  233 bits (594), Expect = 2e-65
 Identities = 140/380 (36%), Positives = 221/380 (58%), Gaps = 8/380 (2%)

Query: 270 DW-FLVGT-VPVHEVFAELDAVAQRMMLTTLAVAAIFIFMGIFLANSIAMPINQIAKRFT 327
           +W ++VGT + V ++ A+      + +L  L V    + + + ++ S+  P+ +    F 
Sbjct: 178 EWGWIVGTGIYVDDIAAQKQEFTWQYLLVFLLVWGPVMALLLMISRSVTEPLQRTLMAFK 237

Query: 328 DLGRGDGDLSQRIEVKGNDEIAQLSKGFNGFIEKIHQ---SIKDVAQTSRELQVAAEGVS 384
           ++  G+ +L+ R+E +G DE++Q+S  FN F+ +I     S++D    SR+L  +   V+
Sbjct: 238 NIAEGEANLTLRLEERGRDELSQVSVYFNAFVGRIQSLVISVRDSVDHSRQLSSSLSNVA 297

Query: 385 RKALVTHDNSQQQRDQTIQVVTAINQMGATISEIASNAATAAETANQASGNADQGRNVVN 444
            +A    ++ QQ+   T  V  AINQM AT SE+A+NA  AA++A  A   AD    VV 
Sbjct: 298 HQAAHATNSMQQE---TQSVAAAINQMSATASEVAANAQLAAKSAKNADSQADSTNLVVT 354

Query: 445 KAKEAISRLAHDIENTGKVVEQLASTTQEIGSILDAIRGISEQTNLLALNAAIEAARAGD 504
            A   + +L+ ++E T ++ + L  ++ EIG ILD I GI+EQTNLLALNAAIEAARAG+
Sbjct: 355 HAMGNVRQLSSELEETSEIAKALKVSSGEIGQILDVIVGIAEQTNLLALNAAIEAARAGE 414

Query: 505 QGRGFAVVADEVRNLASRTASSTEEIQKMINQLQNDAKNAVSAMDAGKTVTHQGVAASDE 564
            GRGFAVVADEVR LASRT  ST+EI  +I  ++       +++   +  +   V  + +
Sbjct: 415 AGRGFAVVADEVRTLASRTQQSTQEINAIIEAIRGAVDKVNASVARARQQSDNTVDETAQ 474

Query: 565 AVQVLMSISDRIHDISDRNTQVATATEEQSTVVHTINQNIEEINAINEVTTSTAEELADA 624
            +  L  I   I  I+D N Q+ATAT+EQS V+  +N+NI  IN I+    S +E +   
Sbjct: 475 VMDALGLIKQAIGQINDMNLQIATATDEQSAVIAELNENINRINEISVENLSKSETVGHT 534

Query: 625 SKSLRELSGRLDKLVGNFKL 644
           S  + E S ++ +L+  FK+
Sbjct: 535 SDRIAEDSRQMAQLIAVFKV 554