Pairwise Alignments

Query, 644 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 495 a.a., putative methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella amazonensis SB2B

 Score =  232 bits (592), Expect = 3e-65
 Identities = 131/375 (34%), Positives = 218/375 (58%), Gaps = 5/375 (1%)

Query: 275 GTVPVHEVFAELDAVAQRMMLTTLAVAAIFIFMG-----IFLANSIAMPINQIAKRFTDL 329
           G + V    A ++A    ++L  LA  A+ + +      I L   +  P+  +     D+
Sbjct: 121 GKMEVTFTRAPIEARLSSLLLGLLAQGALILLLSMVVIVIILKKLVITPLAHVVSAMEDV 180

Query: 330 GRGDGDLSQRIEVKGNDEIAQLSKGFNGFIEKIHQSIKDVAQTSRELQVAAEGVSRKALV 389
             GDGDL++R+ V+  DEI +L+  FN FIE+IH ++  V +T+ +L   A  +   +  
Sbjct: 181 ASGDGDLTRRLPVESQDEIGRLASAFNAFIEQIHATVTKVQETAAQLIEGAGTLGSLSGA 240

Query: 390 THDNSQQQRDQTIQVVTAINQMGATISEIASNAATAAETANQASGNADQGRNVVNKAKEA 449
            +   Q+QR +T   VTA++Q+ A+ +E+A NA   +E A +A    D+ +   +++   
Sbjct: 241 NNLRVQEQRQETEAAVTAVSQLSASAAEVAGNALRTSEAAAEADAQVDESQRRFDQSLGL 300

Query: 450 ISRLAHDIENTGKVVEQLASTTQEIGSILDAIRGISEQTNLLALNAAIEAARAGDQGRGF 509
             +L  ++      V+QL   TQ+I  ++  I  I+EQTNLLALNAAIEAARAG+QGRGF
Sbjct: 301 TRQLVDELSRCAISVQQLQQETQKIDEVVVVINSIAEQTNLLALNAAIEAARAGEQGRGF 360

Query: 510 AVVADEVRNLASRTASSTEEIQKMINQLQNDAKNAVSAMDAGKTVTHQGVAASDEAVQVL 569
           AVVADEVR LASRT  +T EIQKMI Q+Q    + V+ M A + ++ + ++ ++E   +L
Sbjct: 361 AVVADEVRTLASRTQQATGEIQKMIQQVQTRVNDTVTVMGASQQLSDKSLSQAEEIKSML 420

Query: 570 MSISDRIHDISDRNTQVATATEEQSTVVHTINQNIEEINAINEVTTSTAEELADASKSLR 629
            S++  + +I+  NT+VA A  EQ++V   I++++ ++  I+   ++ +  LA + + L 
Sbjct: 421 ASVTRLVSNINAMNTEVAHAASEQTSVTENISRSLNDLAGISGSASADSASLAQSGERLF 480

Query: 630 ELSGRLDKLVGNFKL 644
           +   RL  LV +F+L
Sbjct: 481 QQGERLRALVNSFRL 495