Pairwise Alignments

Query, 644 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 674 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella loihica PV-4

 Score =  237 bits (605), Expect = 1e-66
 Identities = 138/362 (38%), Positives = 216/362 (59%), Gaps = 6/362 (1%)

Query: 285 ELDAVAQRMMLTTLAVAAIFIFMGIFLANSIAMPI-NQIAKRFTDLG-RGDGDLSQRIEV 342
           E+D+ + +    TLA+  I I + + ++ ++  P+ N + K    L     G+L+ +++ 
Sbjct: 317 EIDSASYK----TLALVLIAIVVAVLVSIAVIRPLKNSLDKVNNALNILASGNLTHKLDD 372

Query: 343 KGNDEIAQLSKGFNGFIEKIHQSIKDVAQTSRELQVAAEGVSRKALVTHDNSQQQRDQTI 402
            G+DE A+LS+  N  ++ +   I+ +   S +L  AAE  S     T    Q+Q++Q  
Sbjct: 373 SGHDEFAELSRNCNRLVDSLRTLIQGILDRSNQLAAAAEETSAITAQTTAGIQEQKNQVD 432

Query: 403 QVVTAINQMGATISEIASNAATAAETANQASGNADQGRNVVNKAKEAISRLAHDIENTGK 462
           QV TA  Q+ ++  +++++A  A     QA   A   R + ++ K  I  LA ++   G+
Sbjct: 433 QVATATTQLSSSAMQVSTSADEALNQIRQADEEAQHMRAIADENKRTILALADEVAKAGQ 492

Query: 463 VVEQLASTTQEIGSILDAIRGISEQTNLLALNAAIEAARAGDQGRGFAVVADEVRNLASR 522
           V+ ++ S +  IGSILD IRGI+EQTNLLALNAAIEAARAG+QGRGFAVVADEVR+LASR
Sbjct: 493 VINKVHSDSASIGSILDVIRGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLASR 552

Query: 523 TASSTEEIQKMINQLQNDAKNAVSAMDAGKTVTHQGVAASDEAVQVLMSISDRIHDISDR 582
           T  ST+EIQ+MI  LQ   + AVS M+ G+   +  V  +++A   L SIS+ +H   D 
Sbjct: 553 TQDSTQEIQQMIQVLQQGTQEAVSVMELGRQQANSCVEKTEQANVALESISNAVHYAHDS 612

Query: 583 NTQVATATEEQSTVVHTINQNIEEINAINEVTTSTAEELADASKSLRELSGRLDKLVGNF 642
            T +A A +EQ+ V   +++ +E I AI+E T + A++ A +S  + +L+  L   VG F
Sbjct: 613 GTHIANAAQEQNLVSQQVSEKLEHIAAISEETATGADQTAQSSHQVAQLAEELQASVGEF 672

Query: 643 KL 644
           K+
Sbjct: 673 KV 674