Pairwise Alignments

Query, 644 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 546 a.a., methyl-accepting chemotaxis protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  226 bits (576), Expect = 2e-63
 Identities = 132/355 (37%), Positives = 202/355 (56%), Gaps = 2/355 (0%)

Query: 292 RMMLTTLAVAAIF--IFMGIFLANSIAMPINQIAKRFTDLGRGDGDLSQRIEVKGNDEIA 349
           +M+   +  + IF  + M   L   I  PI  + K+  ++  G+      +     DE  
Sbjct: 192 KMLSIIVGFSTIFFVVVMAFLLIRQIQNPIMWLLKQTHEVSAGNLTNKLNMNAFARDEFG 251

Query: 350 QLSKGFNGFIEKIHQSIKDVAQTSRELQVAAEGVSRKALVTHDNSQQQRDQTIQVVTAIN 409
           QL++ FN   + +H  + +V+ +  +L  AAE +S  AL + +N + Q+++  Q+ TA++
Sbjct: 252 QLAESFNEMQDNLHMLVSEVSNSIVQLSSAAEEISSVALHSSNNMETQQNELNQLATAMH 311

Query: 410 QMGATISEIASNAATAAETANQASGNADQGRNVVNKAKEAISRLAHDIENTGKVVEQLAS 469
           +M AT+ ++A N   AA  A QAS  A QG   VN +   I ++A  IE T  V+ +L  
Sbjct: 312 EMQATVQDVARNTNDAANAATQASDTATQGSETVNDSIVRIDKVAGAIEATAVVIRKLGD 371

Query: 470 TTQEIGSILDAIRGISEQTNLLALNAAIEAARAGDQGRGFAVVADEVRNLASRTASSTEE 529
            ++ IG +L+ I+GI+EQTNLLALNAAIEAARAG+QGRGFAVVADEVR LA RT  ST  
Sbjct: 372 DSRNIGMVLEVIQGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLAKRTQDSTSH 431

Query: 530 IQKMINQLQNDAKNAVSAMDAGKTVTHQGVAASDEAVQVLMSISDRIHDISDRNTQVATA 589
           I  +I++LQ  A  A   M   + +  + V  + EA + +  IS  +  IS  N Q+ATA
Sbjct: 432 INSIISELQLRANEAEETMQQSQEMMIETVCKAREAGESIAKISSSVSCISQMNIQIATA 491

Query: 590 TEEQSTVVHTINQNIEEINAINEVTTSTAEELADASKSLRELSGRLDKLVGNFKL 644
           TEEQ  V   +N+N+  I+  +E   + A+++A A   L  L+ +L  +V  F +
Sbjct: 492 TEEQGAVSEELNRNVANISGASEDVATGAKQMAMACNDLSHLATQLQDMVKKFHI 546