Pairwise Alignments

Query, 644 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 545 a.a., methyl-accepting chemotaxis protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  242 bits (618), Expect = 3e-68
 Identities = 141/389 (36%), Positives = 223/389 (57%), Gaps = 2/389 (0%)

Query: 257 EEVMVASIYIESMDWFLVGTVPVHEVFAEL-DAVAQRMMLTTLAVAAIFIFMGIFLANSI 315
           E+ +  + Y     W L+    + +V   L + +   +++  L    IF F  + L +SI
Sbjct: 158 EDKLAEARYYPQWGWTLITGAYLSDVKESLYEVMVDYLIIMFLISVPIFAFF-LVLNHSI 216

Query: 316 AMPINQIAKRFTDLGRGDGDLSQRIEVKGNDEIAQLSKGFNGFIEKIHQSIKDVAQTSRE 375
             P+N   +   D+ +G+GDLSQR+  +G DE+A L+  FN F +KI   +  +    + 
Sbjct: 217 TSPLNDAIEALEDIAQGEGDLSQRLSTQGKDEVAHLAHAFNLFAQKIGDMVGHLQPLGQS 276

Query: 376 LQVAAEGVSRKALVTHDNSQQQRDQTIQVVTAINQMGATISEIASNAATAAETANQASGN 435
           L   A+ +      ++ +++    +T  V TA+NQM +T  E+ASN   AA+ A      
Sbjct: 277 LDNDAKLLMLAVEESNQSAEHIHRETGSVATAVNQMLSTTHEMASNTQQAADAATSVKSQ 336

Query: 436 ADQGRNVVNKAKEAISRLAHDIENTGKVVEQLASTTQEIGSILDAIRGISEQTNLLALNA 495
           A Q + V++       +L  +++ +  + ++L   + +IGSILD IR I+EQTNLLALNA
Sbjct: 337 AQQSKGVIDNTVRDTEKLVQELKASEAITQKLGQASGQIGSILDVIRAIAEQTNLLALNA 396

Query: 496 AIEAARAGDQGRGFAVVADEVRNLASRTASSTEEIQKMINQLQNDAKNAVSAMDAGKTVT 555
           AIEAARAG  GRGFAVVADEVR LA+RT  ST EIQK+I+++Q    + + +    +  +
Sbjct: 397 AIEAARAGSHGRGFAVVADEVRALANRTQDSTNEIQKIISEIQTGVGSVMQSNSQTQRQS 456

Query: 556 HQGVAASDEAVQVLMSISDRIHDISDRNTQVATATEEQSTVVHTINQNIEEINAINEVTT 615
            +  A + EA Q + +I + I  ISD NTQ+A+ATEEQS V   IN+NI  I+ + EV+ 
Sbjct: 457 EELQAKAQEAGQAMAAILELIAHISDMNTQLASATEEQSLVTEEINRNICNISELTEVSV 516

Query: 616 STAEELADASKSLRELSGRLDKLVGNFKL 644
              E  + A++SL+++S  +   +G FK+
Sbjct: 517 KANESNSRAAQSLQDISQDMSHTLGQFKI 545