Pairwise Alignments

Query, 644 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 630 a.a., methyl-accepting chemotaxis protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  260 bits (664), Expect = 1e-73
 Identities = 159/482 (32%), Positives = 261/482 (54%), Gaps = 5/482 (1%)

Query: 168 EVKMFANYQLVNGNT--MSGMSKSMDDMVRLLNSFKIEDTGFVFLTNAQGEVQIHRQKEQ 225
           +V   A   +V+G    ++  + ++D +   +   ++   G+  + +  G +  H   + 
Sbjct: 149 QVVTIAEPVMVSGRLFGVAAANLTIDQLTDAVQRLEVPGKGYTLMVDTAGLIISHPNTQL 208

Query: 226 VKSSLQQIYGSGASALLNK--SGFNLISTDYQGEEVMVASIYIESMDWFLVGTVPVHEVF 283
               L +I      + L++  +   +   +  G   +V    + S DW L+  +   E+ 
Sbjct: 209 NNQQLTKIDSHFTPSWLSQRANANTMEERELDGGTQLVYVAAVPSTDWALIFVMNKQEIM 268

Query: 284 AELDAVAQRMMLTTLAVAAIFIFMGIFLANSIAMPINQIAKRFTDLGRGDGDLSQRIEV- 342
           ++  ++A  M    + +  IF  + + +       + ++A    D+  GDGDL+ RI   
Sbjct: 269 SQATSLAWWMSAVGVGLLVIFGLVLVAIFKMQFKDLERVALALNDIAEGDGDLTVRIHTA 328

Query: 343 KGNDEIAQLSKGFNGFIEKIHQSIKDVAQTSRELQVAAEGVSRKALVTHDNSQQQRDQTI 402
             +DEI  L+ GFN F+E++H  I  +   + +L+  A+G S  A       + Q+D+  
Sbjct: 329 NSHDEIGILASGFNRFVERLHGMISRMHNIAGQLEYQAKGSSASAADNSQRIEVQQDEVT 388

Query: 403 QVVTAINQMGATISEIASNAATAAETANQASGNADQGRNVVNKAKEAISRLAHDIENTGK 462
            V TA+ +M +   EIASNA   A+TA  A   ++ G+  V +++++I  LA++++  G+
Sbjct: 389 MVATAVTEMASATEEIASNAEHTAQTAQNAVSLSNHGQKQVMQSQQSIRNLANEVDTAGR 448

Query: 463 VVEQLASTTQEIGSILDAIRGISEQTNLLALNAAIEAARAGDQGRGFAVVADEVRNLASR 522
           ++ +L   +Q+I SIL  I GI+EQTNLLALNAAIEAARAG+QGRGFAVVADEVR L+ R
Sbjct: 449 IISELNEHSQKINSILLTISGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRVLSQR 508

Query: 523 TASSTEEIQKMINQLQNDAKNAVSAMDAGKTVTHQGVAASDEAVQVLMSISDRIHDISDR 582
           T SST+EIQ MI  LQ  A  AV +M     +    VA ++ A + L+ IS  I++ISD 
Sbjct: 509 THSSTQEIQAMIETLQQTAGKAVKSMTQSHDMAETSVADANSASESLLQISKAINEISDM 568

Query: 583 NTQVATATEEQSTVVHTINQNIEEINAINEVTTSTAEELADASKSLRELSGRLDKLVGNF 642
            +Q+ATA EEQ++V   IN+N E I  ++E  +  A+     S+ L  L+  L + V  F
Sbjct: 569 ASQIATAAEEQTSVTSEINRNTESIREVSENLSIEAQSAMVQSQELAHLAASLQQEVSRF 628

Query: 643 KL 644
           KL
Sbjct: 629 KL 630