Pairwise Alignments

Query, 644 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 554 a.a., methyl-accepting chemotaxis protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  250 bits (639), Expect = 1e-70
 Identities = 164/506 (32%), Positives = 259/506 (51%), Gaps = 32/506 (6%)

Query: 163 QEANGEVKMFANYQLVNGNTMSGMSKSMDDMVRLLNSFKIEDTGFVFLTNAQGEVQIHRQ 222
           +EA        NYQL          K   ++ + L   +    G+ F+ ++QG+   H  
Sbjct: 57  KEATEIASGIVNYQL--------SLKDKGNVNQALRDIRFGSAGYFFMYDSQGKNIFHAL 108

Query: 223 KEQVK--SSLQQIYGSGASALLN-----KSGFNLISTDYQ----GEEVMVAS--IYIESM 269
              ++  + +      G   ++      K G    S  YQ     E++   S  + +   
Sbjct: 109 MPNLEGQNKIDMTDPRGTKIIVGLLDAAKRGDGNFSYYYQKPNTNEQIEKISFVMMVPGT 168

Query: 270 DWFLVGTVPVHEVFAELDAVAQRM-----------MLTTLAVAAIFIFMGIFLANSIAMP 318
           DW L     + ++ A ++   Q +           +L  L +     F+ +  A+ + +P
Sbjct: 169 DWMLGTGAYIDDIEAVVEDYRQTVTEQMAEKSLMILLIALVLTGATAFVIMVAAHRMVVP 228

Query: 319 INQIAKRFTDLGRGDGDLSQRIEVKGNDEIAQLSKGFNGFIEKIHQSIKDVAQTSRELQV 378
           I  +A    D+ +G+GDL++R+ VKG DEIAQL + FN F++K+   I DVA  + +++ 
Sbjct: 229 IKNMADNLNDIAKGEGDLTKRLSVKGEDEIAQLGRAFNLFVDKLQHIIGDVASATAKVKT 288

Query: 379 AAEGVSRKALVTHDNSQQQRDQTIQVVTAINQMGATISEIASNAATAAETANQASGNADQ 438
           AA  +  +  V         ++T QVVTAI +M +T SE+A N    AE    A+G+   
Sbjct: 289 AANAIHDQTKVMSSQLLSHNNETDQVVTAITEMSSTASEVAQNTTQVAEATQAATGDVAN 348

Query: 439 GRNVVNKAKEAISRLAHDIENTGKVVEQLASTTQEIGSILDAIRGISEQTNLLALNAAIE 498
            +  V+ + E I+ L   I +    ++ L+  +Q+I S+L  I GI+EQTNLLALNAAIE
Sbjct: 349 AQRCVDASLEEIAALMEQINHAAGSIKSLSEQSQKINSVLSVIGGIAEQTNLLALNAAIE 408

Query: 499 AARAGDQGRGFAVVADEVRNLASRTASSTEEIQKMINQLQNDAKNAVSAMDAGKTVTHQG 558
           AARAG+QGRGFAVVADEVR+LASRT +ST EI +M++ L      AV  MD  +    + 
Sbjct: 409 AARAGEQGRGFAVVADEVRSLASRTQASTLEINEMLSALHKLVSQAVKTMDESQQSCVRS 468

Query: 559 VAASDEAVQVLMSISDRIHDISDRNTQVATATEEQSTVVHTINQNIEEINAINEVTTSTA 618
           V +S    + L S++  +  I+D +TQ+ATA  EQS+V   IN+N+  I  I      ++
Sbjct: 469 VESSRAISESLGSVTSAVTAINDMSTQIATAATEQSSVTEEINRNVYAIQEIVNELLHSS 528

Query: 619 EELADASKSLRELSGRLDKLVGNFKL 644
           E  A  S+++ +    L  LVG FK+
Sbjct: 529 EHAARVSQTVSQEGTNLGNLVGQFKI 554