Pairwise Alignments

Query, 644 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 554 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella sp. ANA-3

 Score =  255 bits (651), Expect = 4e-72
 Identities = 162/481 (33%), Positives = 256/481 (53%), Gaps = 24/481 (4%)

Query: 188 KSMDDMVRLLNSFKIEDTGFVFLTNAQGEVQIHRQKEQVK--SSLQQIYGSGASALLN-- 243
           K   ++ + L   +    G+ F+ ++QG+   H     ++  + +      G   ++   
Sbjct: 74  KDQGNVNQALRDIRFGSAGYFFIYDSQGKNIFHALMPNLEGQNKIDMTDPRGTKIIVGLL 133

Query: 244 ---KSGFNLISTDYQ----GEEVMVAS--IYIESMDWFLVGTVPVHEVFAELDAVAQRM- 293
              K G    S  YQ     E++   S  + +   DW L     + ++ A ++   Q + 
Sbjct: 134 DAAKRGDGNFSYYYQKPNTNEQIEKISYVMMVPGTDWMLGTGAYIDDIEAVVEDYRQTVT 193

Query: 294 ----------MLTTLAVAAIFIFMGIFLANSIAMPINQIAKRFTDLGRGDGDLSQRIEVK 343
                     +L  L +  I  F+ +  A+ + +PI  +A    D+ +G+GDL++R+ VK
Sbjct: 194 EQMADKSFMILLIALVLTGITAFIIMVAAHRMVVPIKNMADSLNDIAKGEGDLTKRLSVK 253

Query: 344 GNDEIAQLSKGFNGFIEKIHQSIKDVAQTSRELQVAAEGVSRKALVTHDNSQQQRDQTIQ 403
           G DEIAQL + FN F++K+   I DVA  + +++ AA  +  +  V         ++T Q
Sbjct: 254 GEDEIAQLGQAFNLFVDKLQTIIGDVANATAKVKSAANAIHDQTKVMSSQLLSHNNETDQ 313

Query: 404 VVTAINQMGATISEIASNAATAAETANQASGNADQGRNVVNKAKEAISRLAHDIENTGKV 463
           VVTAI +M +T SE+A N    AE    A+G+    +  V+ + E I+ L   I N    
Sbjct: 314 VVTAITEMSSTASEVAQNTTQVAEATQAATGDVANAQRCVDASLEEIAGLMSQINNAAGS 373

Query: 464 VEQLASTTQEIGSILDAIRGISEQTNLLALNAAIEAARAGDQGRGFAVVADEVRNLASRT 523
           ++ L+  +Q+I S+L  I GI+EQTNLLALNAAIEAARAG+QGRGFAVVADEVRNLASRT
Sbjct: 374 IKSLSEQSQKINSVLSVIGGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLASRT 433

Query: 524 ASSTEEIQKMINQLQNDAKNAVSAMDAGKTVTHQGVAASDEAVQVLMSISDRIHDISDRN 583
            +ST EI +M+++L      AV  MD  +    + V +S    + L S++  +  I+D +
Sbjct: 434 QASTLEINEMLSELHKLVSVAVKTMDESQQSCVRSVDSSRAISESLGSVTSAVTAINDMS 493

Query: 584 TQVATATEEQSTVVHTINQNIEEINAINEVTTSTAEELADASKSLRELSGRLDKLVGNFK 643
           TQ+ATA  EQS+V   IN+N+  I  I      ++E+ A  S+++ +    L KLVG FK
Sbjct: 494 TQIATAATEQSSVTEEINRNVYAIQEIVNELLHSSEDAAKVSQTVSQEGINLGKLVGQFK 553

Query: 644 L 644
           +
Sbjct: 554 I 554