Pairwise Alignments

Query, 644 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 495 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella sp. ANA-3

 Score =  241 bits (614), Expect = 7e-68
 Identities = 141/369 (38%), Positives = 216/369 (58%), Gaps = 2/369 (0%)

Query: 276 TVPVHEVFAELDAVAQRMMLTTLAVAAIFIFMGIFLANSIAMPINQIAKRFTDLGRGDGD 335
           T+PV    ++L        L  LA + + IF  I L   +  P++++     ++  GDGD
Sbjct: 129 TLPVKAQLSDLLLGYFLQALLILAGSLLVIF--IILKRLVISPLDKVVAALEEIANGDGD 186

Query: 336 LSQRIEVKGNDEIAQLSKGFNGFIEKIHQSIKDVAQTSRELQVAAEGVSRKALVTHDNSQ 395
           LS R+ V+  DEI +L+  FNGF+E+IH +I  V +TS  L   A+ +   +   +   Q
Sbjct: 187 LSHRLPVESEDEIGKLANAFNGFVEQIHGTITRVHETSGLLLGDAKALGTLSQSNNQRVQ 246

Query: 396 QQRDQTIQVVTAINQMGATISEIASNAATAAETANQASGNADQGRNVVNKAKEAISRLAH 455
            Q  +T   VTA+ Q+ A+ +E+A NA   A+ A QA    D G+   +       +LA 
Sbjct: 247 AQLKETEAAVTAVTQLSASANEVAINAKRTADAATQADRAVDDGQRQFDSGLAITRQLAG 306

Query: 456 DIENTGKVVEQLASTTQEIGSILDAIRGISEQTNLLALNAAIEAARAGDQGRGFAVVADE 515
           ++  + + V QL   TQ I  ++  I  I+EQTNLLALNAAIEAARAG+QGRGFAVVADE
Sbjct: 307 ELARSAQSVSQLQQETQRIDEVVVVISSIAEQTNLLALNAAIEAARAGEQGRGFAVVADE 366

Query: 516 VRNLASRTASSTEEIQKMINQLQNDAKNAVSAMDAGKTVTHQGVAASDEAVQVLMSISDR 575
           VR+LASRT  +T EIQKMI Q+Q+     V+ M + +T+++QGV  S+E   VL  ++D 
Sbjct: 367 VRSLASRTQQATGEIQKMIQQVQSRVAETVNVMQSSQTLSNQGVNRSEEIKLVLSKVTDL 426

Query: 576 IHDISDRNTQVATATEEQSTVVHTINQNIEEINAINEVTTSTAEELADASKSLRELSGRL 635
           + +IS+ N +V+ A +EQ+ V   I++ + ++  ++   +  +E LA +S+ L     RL
Sbjct: 427 VSNISNMNIEVSHAAQEQTCVTEAISRTLNDLANVSGSASLDSEHLAQSSERLFHQGERL 486

Query: 636 DKLVGNFKL 644
             LV +F+L
Sbjct: 487 RTLVTSFRL 495