Pairwise Alignments

Query, 644 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 543 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella sp. ANA-3

 Score =  237 bits (605), Expect = 9e-67
 Identities = 131/363 (36%), Positives = 209/363 (57%), Gaps = 2/363 (0%)

Query: 284 AELDAVAQRMMLTTLA--VAAIFIFMGIFLANSIAMPINQIAKRFTDLGRGDGDLSQRIE 341
           A   A  Q  +  T+A  VA + + +  F    I   I  I  R  D+  GDG+L+QRI 
Sbjct: 180 ASEQATTQTQISVTIATLVAIVALVIAYFGPKIIVNAIRDITDRINDIVDGDGNLTQRIP 239

Query: 342 VKGNDEIAQLSKGFNGFIEKIHQSIKDVAQTSRELQVAAEGVSRKALVTHDNSQQQRDQT 401
           +   DEI +L+  FN F+ ++ Q +  +   ++++    E ++ K+  T   S +Q    
Sbjct: 240 ITRQDEIGELANAFNLFVAQLQQMVIAIISQTKDVSQTVENLATKSTTTIGISYEQEQFV 299

Query: 402 IQVVTAINQMGATISEIASNAATAAETANQASGNADQGRNVVNKAKEAISRLAHDIENTG 461
             +VTA+N+M A + E+ASNA   A    + +    +G+N++ ++   I +L+  ++   
Sbjct: 300 DTIVTAVNEMSAAVREVASNALHTATEITKVNDQTIEGKNILTQSVNHIQQLSESVKQAV 359

Query: 462 KVVEQLASTTQEIGSILDAIRGISEQTNLLALNAAIEAARAGDQGRGFAVVADEVRNLAS 521
            V+E+L+  +  I S+LD IR I+EQTNLLALNAAIEAARAG+QGRGFAVVADEVR LAS
Sbjct: 360 AVIEKLSVNSANIASVLDVIRSIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLAS 419

Query: 522 RTASSTEEIQKMINQLQNDAKNAVSAMDAGKTVTHQGVAASDEAVQVLMSISDRIHDISD 581
           RT +ST++IQ+MI +LQ    +AV ++++G ++T+  V  + +    L  I +    +S+
Sbjct: 420 RTETSTQDIQRMIEELQRGVNDAVKSIESGASLTNSTVTLASQTQDALDEILNSTSKVSE 479

Query: 582 RNTQVATATEEQSTVVHTINQNIEEINAINEVTTSTAEELADASKSLRELSGRLDKLVGN 641
            +TQ ATATEEQ+ V   IN+N+ E++       +  +E      + + +   L K V  
Sbjct: 480 MSTQTATATEEQTHVTEEINRNLTELSDKTRYCNTVIQETQQIVVNTQTICSNLQKEVSR 539

Query: 642 FKL 644
           FK+
Sbjct: 540 FKV 542