Pairwise Alignments

Query, 311 a.a., DUF58 domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 309 a.a., hypothetical protein (RefSeq) from Shewanella loihica PV-4

 Score =  180 bits (456), Expect = 4e-50
 Identities = 123/305 (40%), Positives = 169/305 (55%), Gaps = 6/305 (1%)

Query: 5   HALPLHANGVSLCLEELLAYEQQTVHFLPPARQIWSQRVGQHQSRRL-GRGMDFSEVRQY 63
           +ALPL A+GVSL  +ELLA  Q     LP  +      +  H++  + GRGM+F+EVR Y
Sbjct: 4   NALPLFADGVSLNQKELLAC-QNLARALPERKSKARAALAGHRASSIKGRGMEFAEVRHY 62

Query: 64  QAGDDIRTIDWRVTARTGKPHTKLFSEERERTVVLYIDLSPSMQFGSCLLLKSVQAAHLA 123
           QAGDD+RTIDWRVTARTGK HTKLF EERER V+L +DLS S+ FGS L+L+SVQAAHLA
Sbjct: 63  QAGDDVRTIDWRVTARTGKAHTKLFVEERERPVLLLLDLSHSLYFGSSLMLQSVQAAHLA 122

Query: 124 SLLSWLAVKQQDRVGAVIDLGHRLIEIKPGSRQRGVLTILAAC--VEAQQHIPPTQPTTR 181
           + L W AV   DR+GA+I      +E+KP SRQ G+L +++A   +  QQ     QP  +
Sbjct: 123 ATLGWAAVGHGDRLGALIASEAEHLELKPRSRQTGMLALISAIEQIHQQQLHQLNQPVKQ 182

Query: 182 TLALHEVLSTLNRLCPKDSEVVLISDFVDLDTEQHALSLRQLCRHNRVQLVQIHDPLEQG 241
              + +    L R+    S + +ISD       Q    L +L RH  +    I DPL QG
Sbjct: 183 PEHIFKACQRLRRIAKPGSLIWIISDGSHFG-PQCLGPLSELKRHCDIGAFLITDPLRQG 241

Query: 242 DTSFRGIEQVQNNQETRWLNFSINSTRAGIKKAFETQKEKLKSLCLLLEMDYRSVSSGIP 301
                   Q       + L     S  A + +  +TQ++   ++   +    R + +  P
Sbjct: 242 TLKLPPQFQFPVRDGDKELMLDRRSYDAWLAQQ-QTQQQGFITMMNQINARPRRIDAAQP 300

Query: 302 LLQQL 306
           L QQ+
Sbjct: 301 LDQQI 305