Pairwise Alignments

Query, 311 a.a., DUF58 domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 327 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  166 bits (420), Expect = 7e-46
 Identities = 115/311 (36%), Positives = 170/311 (54%), Gaps = 16/311 (5%)

Query: 5   HALPLHANGVSLCLEELLAYEQQTVHFLPPARQIWSQR--VGQHQSRRLGRGMDFSEVRQ 62
           + LPL A+G+ L  +ELLA   QT+    P R   ++    G   S   GRGM+F+EVR 
Sbjct: 22  NGLPLFADGLHLTEKELLAC--QTIARAIPERHSRARANLAGHRSSLIKGRGMEFAEVRH 79

Query: 63  YQAGDDIRTIDWRVTARTGKPHTKLFSEERERTVVLYIDLSPSMQFGSCLLLKSVQAAHL 122
           YQ GDD+RTIDWRVTARTG+ HTKLF EERER ++L +DLS S+ FGS LLL+SVQA HL
Sbjct: 80  YQQGDDVRTIDWRVTARTGQTHTKLFIEERERPILLLLDLSQSLYFGSSLLLQSVQAGHL 139

Query: 123 ASLLSWLAVKQQDRVGAVIDLGHRLIEIKPGSRQRGVLTILAA-CVEAQQHI-----PPT 176
           A+ L W A+   DR+GA+I      +E+KP SR++G+L +++  C   +Q +      P 
Sbjct: 140 ATTLGWNAINHGDRLGALIACESEHLELKPRSRRQGILQLISGLCRVHEQQLNQLGSHPR 199

Query: 177 QPTTRTLALHEVLSTLNRLCPKDSEVVLISDFVDLDTEQHALSLRQLCRHNRVQLVQIHD 236
            P      +      L R+    S + +I+D     T Q    L +L RH  +    I D
Sbjct: 200 DPD----HILRACQRLQRIAKPGSLIWIITDGSHF-TPQCIAPLTELKRHCDIGAYLITD 254

Query: 237 PLEQGDTSFRGIEQVQNNQETRWLNFSINSTRAGIKKAFETQKEKLKSLCLLLEMDYRSV 296
           PL QG  +      +      + L  + +S +A +    + Q + + ++   L +  + +
Sbjct: 255 PLRQGSLNLPKQFSLPVRDAEQDLVLTHHSYQAWLALQHQQQNDFI-AMMQKLRVHTQFI 313

Query: 297 SSGIPLLQQLS 307
            +G PL +QL+
Sbjct: 314 DAGRPLAEQLA 324