Pairwise Alignments

Query, 311 a.a., DUF58 domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 289 a.a., conserved hypothetical protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  126 bits (317), Expect = 5e-34
 Identities = 72/193 (37%), Positives = 113/193 (58%), Gaps = 9/193 (4%)

Query: 44  GQHQSRRLGRGMDFSEVRQYQAGDDIRTIDWRVTARTGKPHTKLFSEERERTVVLYIDLS 103
           GQ+ S   GRGM FSEVR+YQ GDDIR IDW VTAR  KP+ K+F EERE TV+L +D+S
Sbjct: 27  GQYHSAFKGRGMSFSEVREYQFGDDIRDIDWNVTARFNKPYVKVFEEERELTVMLMVDVS 86

Query: 104 PSMQFGSCLLLKSVQAAHLASLLSWLAVKQQDRVGAVIDLGHRLIEIKPGSRQRGVLTIL 163
            S++FG+   LK      +A+ L++ A++  D++G +         I P   ++ +L I+
Sbjct: 87  GSLEFGTVKQLKKDMVTEIAATLAFSAIQNNDKIGVIFFSDRIEKFIPPKKGRKHILYII 146

Query: 164 AACVEAQQHIPPTQPTTRTLALHEVLSTLNRLCPKDSEVVLISDFVDLDTEQHALSLRQL 223
              ++ Q   P ++ T   LAL  + + + R C       ++SDF+D D  ++AL++   
Sbjct: 147 RELIDFQ---PESRRTNIRLALEYLTNVMKRRC----TAFILSDFIDQDNFKNALTIAN- 198

Query: 224 CRHNRVQLVQIHD 236
            R + V  +Q++D
Sbjct: 199 -RKHDVVALQVYD 210