Pairwise Alignments

Query, 646 a.a., VWA domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 578 a.a., TPR domain protein in aerotolerance operon from Pseudomonas fluorescens FW300-N2E2

 Score =  259 bits (661), Expect = 3e-73
 Identities = 174/562 (30%), Positives = 268/562 (47%), Gaps = 28/562 (4%)

Query: 4   LIFLYPHWLG----LLVPLLLLAAWRGLRQNQR----GLIAP---HLAQALGIETRTRRS 52
           +I  +PHWL     LL+PLL    W+   + +R     +I P   H     G   R  R 
Sbjct: 1   MIAFWPHWLRPWFVLLLPLLGWLLWQLWHRQKRVGRWQMILPPAFHTVLLSGGSGRESRL 60

Query: 53  FGGVLALSWIVATLAMAGPSWQSAERPSVQNSAARVLIMDMSRSMYATDLAPNRLTQARY 112
               L L W++  LA+ GPSW   E+ S + +   V++++++  M ATD+ P RL QAR 
Sbjct: 61  PWIALGLGWLLIVLALLGPSWARVEQTSQKPADPLVVVLELTPEMLATDVPPTRLEQARR 120

Query: 113 KALDLLKGWQEGSTGLVAYAADAYVVSPLTSDSATLANLLPNLSPDIMPYQGSDAAAAVS 172
           K LDLL+   +  T ++ YA  A+ + PL+ D +T ANLL  L+P IMP  G  A  AV 
Sbjct: 121 KVLDLLQNRSDAQTAIIVYAGSAHTLVPLSDDLSTSANLLEALAPSIMPQSGHRADLAVR 180

Query: 173 LAITMLQQSGHQQGDLILITDDMSVTEREKLISLLQGSPWRLVTLAIGTPSGAPIPLGDG 232
            A+ +L Q     G ++LI   ++  ER+ +   L GS  + + L IGT  GAP+P  DG
Sbjct: 181 KALALLDQGELGHGRILLIGSSLNEQERQGIRQALDGSATQWLMLGIGTREGAPVPQEDG 240

Query: 233 SLLKDRQGQTVIAKTAFDQLQQLSQSVQGVLTAYRADGADVAHILSLTQQPIDIAESTSR 292
           S LKD QG  ++ +     L+  +  + G     R D +D+   L L   P  +      
Sbjct: 241 SYLKDAQGSILLPRLDSPGLKAFANKLDGRYRPARLDDSDLRG-LGLLDGPRHLRSDGQT 299

Query: 293 QAITERVNNGYWLVLPLLIAALCLFRRGVIFSLLLLFGVSLPNQQ-AWASAWLNQDQQAM 351
             +    + GYWL+LPLL+ A C  RRG +F L LLF +        +   WL  DQQ  
Sbjct: 300 LRLDTWADQGYWLLLPLLLLAACAGRRGWLFCLPLLFMLPQTGHAFEFQDLWLRADQQGQ 359

Query: 352 RMFNNEQYAQAAEAFRDPRWQGAARYYAKDYQGAIDAYSQIANPDTATQYNLANAYAQAG 411
            +   ++ A+AA  F D +WQG A Y A  Y  A   +++    D    YN  NA A++G
Sbjct: 360 HLLKQKRPAEAAAHFEDSQWQGVALYEAGQYSEAARRFAE--GNDARAHYNRGNALARSG 417

Query: 412 ELQKAQDLYEHVLKQEPNHQDARHNLDVVKAAQQQQQQQQQQQQQQQQQQQQQQQQQQQQ 471
           EL+ A D YE  L+ +P+ + A+ N  +V++  +Q     ++ +  + ++  + +Q    
Sbjct: 418 ELEAALDAYEQALELQPDLRPAQTNKALVESLLKQPAPVPEEPKPAESEEPARAEQSPDT 477

Query: 472 QQQQQQQQQQQQQQQQQQDSSSGASGQEAQEDSSANPSNTAQEQEASSQTKGASTPDPQQ 531
               Q  +  Q   +      + A+  E Q   +A P  TAQ+        G+  PD Q 
Sbjct: 478 DSPTQSSEPGQPSVE------TSATSDEPQPPRTAQPP-TAQD------VPGSELPDEQT 524

Query: 532 DLQESTEPKANAKPQEQPNAVD 553
                         +EQ  A++
Sbjct: 525 TTPPLRPAAGQRNEEEQRQALE 546



 Score = 34.7 bits (78), Expect = 1e-05
 Identities = 29/162 (17%), Positives = 69/162 (42%), Gaps = 7/162 (4%)

Query: 462 QQQQQQQQQQQQQQQQQQQQQQQQQQQQDSSSGASGQEAQEDSSANPSNTAQEQEASSQT 521
           QQ Q   +Q++  +     +  Q Q      +G   + A+  +  N +  A     ++  
Sbjct: 356 QQGQHLLKQKRPAEAAAHFEDSQWQGVALYEAGQYSEAARRFAEGNDAR-AHYNRGNALA 414

Query: 522 KGASTPDPQQDLQESTEPKANAKPQEQPNAVDDAQAGEPSAHREQSKDSQNGQPSGTEQN 581
           +           +++ E + + +P +   A+ ++   +P+   E+ K +++ +P+  EQ+
Sbjct: 415 RSGELEAALDAYEQALELQPDLRPAQTNKALVESLLKQPAPVPEEPKPAESEEPARAEQS 474

Query: 582 ---DEQSDKANAAQPSTSVTTSSDPNLDPMLRKLEQVESARD 620
              D  +  +   QPS   + +SD   +P   +  Q  +A+D
Sbjct: 475 PDTDSPTQSSEPGQPSVETSATSD---EPQPPRTAQPPTAQD 513