Pairwise Alignments

Query, 646 a.a., VWA domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 573 a.a., Tetratricopeptide repeat. from Pseudomonas stutzeri RCH2

 Score =  284 bits (726), Expect = 9e-81
 Identities = 192/578 (33%), Positives = 294/578 (50%), Gaps = 15/578 (2%)

Query: 1   MSSLI--FLYPHWLGLLVPLLLLAAWR-GLRQNQRGLIAPHLAQALGIETRTRRSFGG-- 55
           MS L+   L P+WL +++PLL+   WR   RQ Q G     L +A      TR       
Sbjct: 1   MSELLPHLLRPYWL-IILPLLIWLLWRLWHRQLQIGRWQRLLPEAFHAALLTRGRLRHSR 59

Query: 56  ----VLALSWIVATLAMAGPSWQSAERPSVQNSAARVLIMDMSRSMYATDLAPNRLTQAR 111
               VL L+W++A +A+ GPSWQ  E+PSV+ S   V++++++ SM A D+ P RL QA+
Sbjct: 60  LPWLVLGLAWLLAVIALLGPSWQRFEQPSVKRSDPLVVLLELTPSMLAGDVPPTRLEQAK 119

Query: 112 YKALDLLKGWQEGSTGLVAYAADAYVVSPLTSDSATLANLLPNLSPDIMPYQGSDAAAAV 171
            K LDLL+  Q+  T +V YA  A+ V PL+ D AT  NLL  L P +MP  G  A  AV
Sbjct: 120 RKLLDLLERRQDVQTAVVVYAGSAHTVVPLSDDLATTRNLLDALHPALMPEPGQRADLAV 179

Query: 172 SLAITMLQQSGHQQGDLILITDDMSVTEREKLISLLQGSPWRLVTLAIGTPSGAPIPLGD 231
           +  + +L+Q+G  +G L+LI   +   ER  + +L+QG   RL+ L +GT  GAPI   +
Sbjct: 180 AKGLALLEQAGLGRGRLLLIGSSLDEHERGAIKALMQGRDERLLALGVGTEQGAPIAGEN 239

Query: 232 GSLLKDRQGQTVIAKTAFDQLQQLSQSVQGVLTAYRADGADVAHILSLTQQPIDIAESTS 291
           GS LKD  G  +I +    +LQ+L+  + G     R    D+A  L L  Q   +     
Sbjct: 240 GSFLKDDHGAILIPRLDNARLQRLATELGGHYQQARLGDDDLA-ALGLLDQTGTLQHDDE 298

Query: 292 RQAITERVNNGYWLVLPLLIAALCLFRRGVIFSL-LLLFGVSLPNQQAWASAWLNQDQQA 350
              +   ++ G+WL++PLL+ A    RRG +F L LLL      +       WL +DQQ 
Sbjct: 299 LTRLEAWLDQGHWLLVPLLLLAALAGRRGWLFCLPLLLLQPQAASAFEMDDLWLRRDQQG 358

Query: 351 MRMFNNEQYAQAAEAFRDPRWQGAARYYAKDYQGAIDAYSQIANPDTATQYNLANAYAQA 410
            R+   +Q A+AAE F D RWQ  ARY A DY GA + +++      A  YN  NA A+ 
Sbjct: 359 QRLLEAQQPAEAAERFVDRRWQATARYQAGDYAGAAELFAE--GNTAADHYNRGNALARG 416

Query: 411 GELQKAQDLYEHVLKQEPNHQDARHNLDVVKAAQQQQQQQQQQQQQQQQQQQQQQQQQQQ 470
             L+ A + YE  L+ +P+ Q A+ N  +V+   +++Q+Q + + + +QQQ+Q +  + Q
Sbjct: 417 EALEAAIEAYEQALELQPDLQQAQRNKALVEELLRRRQEQPEPEPEPEQQQEQTEPDEPQ 476

Query: 471 QQQQQQQQQQQQQQQQQQQDSSSGASGQEAQEDSSANPSNTAQEQEASSQTKGASTPDPQ 530
            Q Q  +            +     +   A E S++  +  A EQ+A++         P 
Sbjct: 477 PQPQPPESGSASAPSPGHAEGEPERAASGAVEPSTSETTTEASEQDAAT-ALAQHEALPD 535

Query: 531 QDLQESTEPKANAKPQEQPNAVDDAQAGEPSAHREQSK 568
           Q+ Q++ E      P      +      E   H+E S+
Sbjct: 536 QERQQAMEQWLRQIPDNPGELLRRKFLYEQRKHQETSR 573