Pairwise Alignments

Query, 646 a.a., VWA domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 701 a.a., TPR domain-containing protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  387 bits (995), Expect = e-112
 Identities = 234/628 (37%), Positives = 333/628 (53%), Gaps = 21/628 (3%)

Query: 6   FLYPHWLGLLVPLLLLAAWRGLRQNQ----RGLIAPHLAQALGIETRTRRSFGGV--LAL 59
           F+ P WL L +PLL +  +   RQ+     +G IAPHLA+ L  E   RRS  G+  L +
Sbjct: 4   FIRPEWLLLFIPLLPVLWFLNRRQSVSSAWQGYIAPHLARVLLTEGEGRRSGVGLWWLGV 63

Query: 60  SWIVATLAMAGPSWQSAERPSVQNSAARVLIMDMSRSMYATDLAPNRLTQARYKALDLLK 119
           +W V TLA++GP+      P     AARVL+MDMS SMYATDL PNRLTQAR++A+DL+ 
Sbjct: 64  AWTVTTLALSGPAITKEPMPVFSAGAARVLVMDMSISMYATDLPPNRLTQARFRAIDLIN 123

Query: 120 GWQEGSTGLVAYAADAYVVSPLTSDSATLANLLPNLSPDIMPYQGSDAAAAVSLAITMLQ 179
              +G T LVAYA +A+V+SPLT D ATL NLLP+LSPDIMP  GS  AA +SLA  +L 
Sbjct: 124 QLSDGDTALVAYAGEAFVISPLTRDKATLLNLLPSLSPDIMPLLGSSPAAGISLARDLLT 183

Query: 180 QSGHQQGDLILITDDMSVTEREKLISLLQGSPWRLVTLAIGTPSGAPIPLGDGSLLKDRQ 239
           Q GH  GD++L+TD +   +   +   L+GSP+RL     GT  GAP+ L +GS ++   
Sbjct: 184 QGGHPDGDIVLMTDGLDAVDVADVKRSLKGSPFRLTVYGFGTAQGAPMKLPNGSFVRGND 243

Query: 240 GQTVIAKTAFDQLQQLSQSVQGVLTAYRADGADVAHILSLTQQPIDIAESTSRQAITERV 299
              V+ K   + L  L+QS +G+      DG+DV+ ++    +     E+T  +   +  
Sbjct: 244 DNLVLPKLDAELLAGLAQSERGIWQPSTLDGSDVSRLVKWLSRE---GEATDTELTGDTW 300

Query: 300 NN-GYWLVLPLLIAALCLFRRGVIFSLLL--LFGVSLPNQQAWASAWLNQDQQAMRMFNN 356
            + G +L L LL+ AL  FRRGV+ S+LL  +  +SL +Q+A AS W   DQQAM  F  
Sbjct: 301 QDLGPYLALLLLLPALLSFRRGVLASMLLPAMLALSLSSQEAEASIWQTPDQQAMEAFRQ 360

Query: 357 EQYAQAAEAFRDPRWQGAARYYAKDYQGAIDAYSQIANPDTATQYNLANAYAQAGELQKA 416
           + +  AA  F    W+ AA Y A DY+ A+  + Q  +   A  YN  NA  Q G   +A
Sbjct: 361 KDFTTAANEFEREDWKAAAHYRAGDYEAALKGFEQ--DSSAAGLYNQGNALMQLGRYDEA 418

Query: 417 QDLYEHVLKQEPNHQDARHNLDVVKAAQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQ 476
              Y+  L+Q+P+ +DA+ N  + KA Q+ Q+ QQ++Q Q  Q      QQQ  Q QQQ 
Sbjct: 419 AKRYQKALEQQPDMEDAKRNAALAKALQEMQESQQEKQGQDGQSSSDDSQQQNSQSQQQN 478

Query: 477 QQQQQQQQQQQQQDSSSGASGQEAQEDSSANPSNTAQEQEASSQTKGASTPDPQQDLQES 536
            QQ   +Q Q  +  +   +G ++Q    +    +   Q+  S  +     + QQ+  + 
Sbjct: 479 SQQSGTEQGQDSEQGAENNNGDQSQSSPQSGDEGSQSAQDGQSPGESQQQHESQQNESQQ 538

Query: 537 TEPKANAKPQEQPNAVDDAQAGEPSAHREQSKDSQNGQPSGTEQND-EQSDKANAAQPST 595
            E +     QE  +A D A  G   +  E + +S++    G   ND   S   NA QP  
Sbjct: 539 NESQQGDAAQETTSADDVANQGSSDSKSEDTNNSESDSGKGDGNNDAPMSADINAEQPKA 598

Query: 596 ------SVTTSSDPNLDPMLRKLEQVES 617
                 S  +S     D      EQ  S
Sbjct: 599 PAPNGESAVSSGSTEADEQTSPAEQAGS 626