Pairwise Alignments

Query, 646 a.a., VWA domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 693 a.a., TPR repeat-containing protein (RefSeq) from Shewanella loihica PV-4

 Score =  361 bits (926), Expect = e-104
 Identities = 243/685 (35%), Positives = 362/685 (52%), Gaps = 62/685 (9%)

Query: 6   FLYPHWLGLLVPLLLLAAWRGLRQNQRG----LIAPHLAQAL-GIETRTRRSFGGVLALS 60
           FL P WL  L+PL LL   R  +++Q       IAPHLA+ L   +   ++   G++A  
Sbjct: 4   FLRPEWLLALIPLALLLWLRKRQRHQASSWNRYIAPHLAKVLVSGQASNKKQHLGLIAFI 63

Query: 61  WIVATLAMAGPSWQSAERPSVQNSAARVLIMDMSRSMYATDLAPNRLTQARYKALDLLKG 120
           W+V+ LA++GP+    + P  + +  RV++MDMS SMYATDLAPNRLTQA++KA DL+K 
Sbjct: 64  WLVSVLALSGPALTKQQLPVFEANLGRVIVMDMSLSMYATDLAPNRLTQAKFKATDLIKS 123

Query: 121 WQEGSTGLVAYAADAYVVSPLTSDSATLANLLPNLSPDIMPYQGSDAAAAVSLAITMLQQ 180
            +EG TGLVAYA DA+ +SPLT D +TL NLLP LSP+IMP  GS+  AA+  A  +L Q
Sbjct: 124 LKEGETGLVAYAGDAFTISPLTRDKSTLLNLLPTLSPEIMPVLGSNLPAALDQAKQLLVQ 183

Query: 181 SGHQQGDLILITDDMSVTEREKLISLLQGSPWRLVTLAIGTPSGAPIPLGDGSLLKDRQG 240
            GH +G++IL+ D ++  +  +  S+L  + +RL  +A+GT  GA I L DG L++D+  
Sbjct: 184 GGHLKGEIILLADGVNPDQIGEAKSILDDTQYRLSIIAMGTNQGAAIRLPDGQLMRDQSD 243

Query: 241 QTVIAKTAFDQLQQLSQSVQGVLTAYRADGADVAHILSLTQQPIDIAESTSRQAITERVN 300
           Q V+++T   QL  L  +  G L AYRADG D+  +     Q  D A+++ RQ    + +
Sbjct: 244 QVVVSQTDLSQLNSLIGNSGGKLFAYRADGKDLESLTQSLSQESD-AKTSDRQGEAWQ-D 301

Query: 301 NGYWLVLPLLIAALCLFRRGVIFSLLLLFGVSLPNQQAWASAWLN----QDQQAMRMFNN 356
            G +L L LL+ AL  FR    F+ L    +  P+ +A A++W +     DQ+AM+ +  
Sbjct: 302 LGPYLALLLLLPALLSFRHA--FAALACLVILAPSPEAQAASWQHPFSTDDQRAMQAYQA 359

Query: 357 EQYAQAAEAFRDPRWQGAARYYAKDYQGAIDAYSQIANPDTATQYNLANAYAQAGELQKA 416
           + +  AAE F  P+W+ A+ Y   DYQ A+  + Q  +   +  +N  N+  Q  +L KA
Sbjct: 360 QDFQGAAEQFTSPQWKAASLYKNGDYQEALKLFEQ--DDSASGLFNQGNSLMQLNDLDKA 417

Query: 417 QDLYEHVLKQEPNHQDARHNLDVVKAAQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQ 476
            + Y+  LK++P    A  NL++ +  +QQQQ  Q Q Q  Q++ +Q Q  Q Q  Q   
Sbjct: 418 IERYQQALKKDPQLTQAEQNLELAEQLKQQQQASQDQGQSDQKKSEQNQSDQDQSNQDSN 477

Query: 477 Q----------QQQQQQQQQQQQDSSSGASGQEAQEDSSANPSNTAQEQEAS----SQTK 522
           +          Q Q QQQ Q  Q S  G+ GQ++Q  +          Q+ S    S  +
Sbjct: 478 KQDKSQQDGAGQNQGQQQGQGDQQSGQGSRGQQSQGQNGQQEDEQGSNQQGSDKQGSDKQ 537

Query: 523 GASTPDPQQDL---QESTEPKANAKPQ---EQPNAVDDAQ-AGEPSAHREQSKDSQ---- 571
            AS   P+Q+    Q S E +A+   Q   +Q  A +DAQ + +P+   +   D+     
Sbjct: 538 SASQESPEQETPEQQASAEQEASQDGQSQNQQTGAANDAQMSADPAKDAKNQMDANANQS 597

Query: 572 -------NGQPSGTEQNDEQSDKANAAQ-----------PSTSVTTSSDP-NLDP-MLRK 611
                   GQ    EQ   Q+  AN  Q           P  + T +  P +L P M R 
Sbjct: 598 DAGQQMGQGQQPQDEQESTQAQAANMTQGKPGEGDEQGEPVAAATNAIAPEDLPPEMQRA 657

Query: 612 LEQVESARDPSALLRAQFILQAQRK 636
           L  V    DP  LLR +  L+ Q++
Sbjct: 658 LTGV--IDDPQVLLRNKMQLEYQKR 680