Pairwise Alignments

Query, 646 a.a., VWA domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 690 a.a., TPR repeat-containing protein (RefSeq) from Shewanella sp. ANA-3

 Score =  406 bits (1044), Expect = e-117
 Identities = 258/682 (37%), Positives = 383/682 (56%), Gaps = 50/682 (7%)

Query: 3   SLIFLYPHWLGLLVPL--LLLAAWRGLRQNQ--RGLIAPHLAQALGIE-TRTRRSFGGVL 57
           SL F+ P WL  L+PL  +L A WR  + N      IAPHLA+ L  E T+  R    +L
Sbjct: 2   SLHFIRPEWLLALLPLAIILWALWRQHQSNSAWNRYIAPHLAKILVTEGTQKSRRPLHIL 61

Query: 58  ALSWIVATLAMAGPSWQSAERPSVQNSAARVLIMDMSRSMYATDLAPNRLTQARYKALDL 117
           A +W++ATLA+AGP+      P       RVL+MDMS SM+ATDLAPNRLTQ +++A DL
Sbjct: 62  AFTWVIATLALAGPALNKQTLPVFAAEQGRVLVMDMSVSMFATDLAPNRLTQTKFRATDL 121

Query: 118 LKGWQEGSTGLVAYAADAYVVSPLTSDSATLANLLPNLSPDIMPYQGSDAAAAVSLAITM 177
           L+G +EG TGL+A+A DA+ +SPLT D+ TL NLLP LSPDIMP  GS+ AAA++ A  +
Sbjct: 122 LRGLKEGETGLIAFAGDAFTISPLTRDTGTLLNLLPTLSPDIMPVLGSNLAAALTQAKNL 181

Query: 178 LQQSGHQQGDLILITDDMSVTEREKLISLLQGSPWRLVTLAIGTPSGAPIPLGDGSLLKD 237
           L Q GH +GD+I++TD ++  + ++  S L GS +RL  +  G+P GAPI L DG L +D
Sbjct: 182 LAQGGHLRGDIIVMTDGITPRQFDEANSALAGSQYRLAIMGFGSPQGAPIRLPDGQLQRD 241

Query: 238 RQGQTVIAKTAFDQLQQLSQSVQGVLTAYRADGADVAHILSLTQQPIDIAESTSRQAITE 297
              + V+AKT F  LQ+L+ +  G++   RADG D+  +        D A++T     T 
Sbjct: 242 SSNEVVVAKTDFGLLQKLADNHNGIMIPNRADGQDLVQLQHWLSDSGD-AKATDLDGETW 300

Query: 298 RVNNGYWLVLPLLIAALCLFRRGVIFSLL------LLFGVSLPN--QQAWASAWLNQDQQ 349
           + + G +L L LLI AL  FR+G++ + L      LL G +  N    AW S W  +DQQ
Sbjct: 301 Q-DLGPYLALLLLIPALLSFRQGMLANWLLMGLAGLLIGAAPQNAHASAWDSLWHTKDQQ 359

Query: 350 AMRMFNNEQYAQAAEAFRDPRWQGAARYYAKDYQGAIDAYSQIANPDTATQYNLANAYAQ 409
           AM+ +  E YA AA+ F  P+WQGAA+Y A +Y+ A+  + Q ++ +    YN  NA  Q
Sbjct: 360 AMQAYQAEDYANAAQKFETPQWQGAAQYKAGEYEQALKNFEQDSSANGL--YNQGNALMQ 417

Query: 410 AGELQKAQDLYEHVLKQEPNHQDARHNLDVVKAAQQQQQQQQQQQQQQQQQQQQQQQQQQ 469
            G+  KA++ Y+  L ++P+   A+ NL++ +    QQQ QQ    Q++Q Q  + QQ Q
Sbjct: 418 LGKPDKAKERYQAALDKQPDFPQAKANLELAEKLLNQQQSQQNADNQEKQSQGDENQQGQ 477

Query: 470 QQQQQQQQQQQQQQQQQQQQDSSSGASGQEAQEDSSANPSN-------TAQEQEASSQTK 522
            Q  QQQ Q QQQ QQ  QQ S +  +  ++QE  S   +N        +QEQE+SS+  
Sbjct: 478 NQNDQQQGQNQQQGQQGDQQSSQNDQAQDQSQEQQSQQQNNPDQADEKPSQEQESSSEQS 537

Query: 523 G----------ASTPDPQQDLQESTEPKANAKPQ--EQPNAVDDAQAGEPSAHRE----- 565
                      AS    +QD Q++ + +  A+ Q  +Q  A ++A+  E  A  E     
Sbjct: 538 NLEQGAQDKQQASDDKAKQDQQDAQQEQQQAEQQANQQNRADNNAEDKEEQASNEAKMQA 597

Query: 566 -----QSKDSQNGQPSGTEQNDEQSDKANAAQPSTSVTTSSDP--NLDPMLRKLEQV--E 616
                +SK  Q  Q +  ++ D++        P T++ +   P  N +P+  ++++    
Sbjct: 598 QVEDDKSKAEQEQQQAVAQKADKEKQSQADKNPDTAIESVEAPPSNSEPLPAEMQRALRG 657

Query: 617 SARDPSALLRAQFILQAQRKPQ 638
            + DP  LLR +  L+ Q++ Q
Sbjct: 658 VSEDPQVLLRNKMQLEYQKRRQ 679



 Score = 48.5 bits (114), Expect = 1e-09
 Identities = 50/226 (22%), Positives = 89/226 (39%), Gaps = 21/226 (9%)

Query: 345 NQDQQAMRMFNNEQYAQAAEAFRDPRWQGAARYYAKDYQGAIDAYSQIANPDTATQYNLA 404
           +++QQ     N++Q  Q  +  +    Q +    A+D Q       Q  NPD A +    
Sbjct: 471 DENQQGQNQ-NDQQQGQNQQQGQQGDQQSSQNDQAQD-QSQEQQSQQQNNPDQADEKP-- 526

Query: 405 NAYAQAGELQKAQDLYEHVLKQEPNHQDARHNLDVVKAAQQQQQQQQQQQQQQQ------ 458
              +Q  E    Q   E   + +    D +   D   A Q+QQQ +QQ  QQ +      
Sbjct: 527 ---SQEQESSSEQSNLEQGAQDKQQASDDKAKQDQQDAQQEQQQAEQQANQQNRADNNAE 583

Query: 459 --------QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQDSSSGASGQEAQEDSSANPSN 510
                   + + Q Q +  + + +Q+QQQ   Q+  +++ S +  +   A E   A PSN
Sbjct: 584 DKEEQASNEAKMQAQVEDDKSKAEQEQQQAVAQKADKEKQSQADKNPDTAIESVEAPPSN 643

Query: 511 TAQEQEASSQTKGASTPDPQQDLQESTEPKANAKPQEQPNAVDDAQ 556
           +        +     + DPQ  L+   + +   + Q    + D+ Q
Sbjct: 644 SEPLPAEMQRALRGVSEDPQVLLRNKMQLEYQKRRQNGQISRDNEQ 689