Pairwise Alignments

Query, 550 a.a., aerotolerance protein BatD from Vibrio cholerae E7946 ATCC 55056

Subject, 555 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  167 bits (422), Expect = 1e-45
 Identities = 122/442 (27%), Positives = 206/442 (46%), Gaps = 29/442 (6%)

Query: 13  FWLTLLVSLLALPAHS-ADLVASVSKNKVVKNEVFQLRVVSHDKVSADALDFSQLEPDFF 71
           F L +L   +  PA + + L ASV +N V++ E F L V + D+V    LD S L  DF 
Sbjct: 7   FILLILCIAVIEPAFALSKLEASVDRNPVMEGEYFVLNVSADDEVDTGKLDTSILLQDFI 66

Query: 72  VGQPSFASSTNIINGNYSQRSEWTVALAAQKVGIVTIPSFQLGSHQTSPIAIQVTEDQDQ 131
           VG+ S + ST I+N +  + + W V LA ++ G +TIPSF +    ++ I + V E   Q
Sbjct: 67  VGRTSVSRSTQIMNFDAVKETRWQVLLAPKQKGQLTIPSFSIDGVSSAEIPLNVVEAGAQ 126

Query: 132 PAQEELAEVRSRLERTELYPGESTLFHAQLIIKEDIRRLRDPNITPPKVEGMRLESASEP 191
           P Q +   + +++   E Y G+   +  +L +  +++R     +  P +EG +++   E 
Sbjct: 127 PEQAKNLFIDAKVSSDEAYVGQLITYKVKLYLAVELQR---GVLNAPVIEGAQIKQVGED 183

Query: 192 KQYPSVLNGVEVTIVEQSFRITAEQAGQFTLSEPVLKAGLLYGNQYSGN----TRLIPIL 247
           K    +++G    ++E+++ I  +  GQ  +        +L  +Q  G         P+ 
Sbjct: 184 KDGSEIIDGRRYRVIERTYGIIPDLPGQVNIKGATFSGDVLVESQRRGGMFGFNESRPMQ 243

Query: 248 TKAKNYSIQVLEKPKHYQGTWLPTAKLSLTQEWQDGQQTLDSTTAYSTQVGHAITREIRL 307
             A + SIQV   P  +QG WL    + L + + +  +           VG  ITR I +
Sbjct: 244 AGAPSLSIQVEPAPSSFQGQWLVADLVVLKESFPEDVKEF--------TVGSPITRTIIV 295

Query: 308 QVSGLTQQQLPNIHIPYPESISVYAEKPQFSTLDNGDTVM---TFKQVLIPRQAGEIHLP 364
             S   +  LP+I    P  +  Y EKPQ  +      ++   +    ++P +AG   LP
Sbjct: 296 LASNADENSLPDISQNLPAELKSYPEKPQRQSFVRDAQIVSQYSITSAIVPSKAGTFTLP 355

Query: 365 EFSLNWWNTQTQAEQTSQVAGMTLQVKPSEETPVLPTPSQPSTPEIRQVVDAGYWPYITL 424
           E  L WWN   + ++ + +   T+ VK   E   +  P+Q ++      V +    +   
Sbjct: 356 EVKLPWWNPHLKRQEIATLPARTINVKGGAE---VDAPTQVASQS--STVSSNQDSWSAN 410

Query: 425 LFALLWLSTALLAW----MLWR 442
           LFALLWL T L+AW    + WR
Sbjct: 411 LFALLWLVT-LVAWGVTFVAWR 431