Pairwise Alignments

Query, 710 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1099 a.a., diguanylate cyclase (GGDEF domain) with PAS/PAC and GAF sensors from Synechococcus elongatus PCC 7942

 Score = 94.7 bits (234), Expect = 2e-23
 Identities = 69/202 (34%), Positives = 103/202 (50%), Gaps = 13/202 (6%)

Query: 497  AKAQEAISVLNETLELEVRNRTRDLQKANEKLDLMAKLDPLTRLGNRRMLEHQLEQTCEQ 556
            +KA      + E L L + N      +  E L      DPLT L NRR L+   EQ   +
Sbjct: 879  SKAPPLAETIAEQLALAIANL-----QLRETLRQENLRDPLTGLFNRRYLQEFFEQELAR 933

Query: 557  TIKEVVNYGVILLDIDHFGLFNNCYGHLEGDIALMRIGNILSRHAQSEHELFCRIGGEEF 616
              +   + G+++LDID+F  FN+ +GH  GD+ L ++   L    ++  ++ CR GGEE 
Sbjct: 934  AKRSGDSIGILMLDIDYFKRFNDEFGHDAGDMVLKQVARALLNQVRAS-DVVCRFGGEEI 992

Query: 617  LLLVANRSAEEIHLLAENIRKSIEAECIEHCEN--PSGELLTVSIGYAASRYKPREIQFD 674
             +L+   S E     A+ IR++I    I + E   PS   LT+SIG AA  +    +  D
Sbjct: 993  AILMPGASLEVSARKADQIRQAIAQLIISYHEQTLPS---LTISIGVAA--FPESGLASD 1047

Query: 675  QLYAEADKALYRAKSQGRNQVI 696
             L   AD +LY+AK+ GRN V+
Sbjct: 1048 TLIKSADTSLYQAKAAGRNCVV 1069