Pairwise Alignments

Query, 710 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 401 a.a., diguanylate cyclase (RefSeq) from Shewanella loihica PV-4

 Score = 97.1 bits (240), Expect = 1e-24
 Identities = 65/220 (29%), Positives = 114/220 (51%), Gaps = 10/220 (4%)

Query: 479 LREVIRMFASNLTEVLMRAKAQEAISVL----NETLELEVRNRTRDLQKANEKLDLMAKL 534
           LR ++ +    L   L   ++ +AI +L      TL + V      L +  +K+   A  
Sbjct: 171 LRALLLLIEPALKSHLASIQSADAIPMLWLYVVMTLWINVIMMGNALTRLVQKMRQQADR 230

Query: 535 DPLTRLGNRRMLEHQLEQTCEQTIKEVVNYGVILLDIDHFGLFNNCYGHLEGDIALMRIG 594
           D LT L NRR ++ QLEQ  ++ +++   Y +IL D+D F   N+ +GH  GD  L++  
Sbjct: 231 DYLTGLWNRRAMQQQLEQLHQRWLRDGQAYSLILFDLDFFKQINDKFGHSAGDAVLVKTA 290

Query: 595 NILSRHAQSEHELFCRIGGEEFLLLVANRSAEEIHLLAENIRKSIEAECIEHCENPSGEL 654
             + +  ++  ++FCR+GGEEFLL++     E   ++A+ +++++    +    N  G L
Sbjct: 291 QQIGKVTRA-MDIFCRLGGEEFLLVLPGTDGEVAEIIAQKLQQALRQSSL----NWQGSL 345

Query: 655 LTVSIGYAASRYKPREIQFDQLYAEADKALYRAKSQGRNQ 694
           + +S  +        +   D L A ADKA+YRAK  GR++
Sbjct: 346 IPISASFGIVTTATGDTP-DSLLALADKAMYRAKETGRDR 384