Pairwise Alignments

Query, 710 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 485 a.a., GGDEF domain protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  101 bits (252), Expect = 7e-26
 Identities = 76/220 (34%), Positives = 107/220 (48%), Gaps = 21/220 (9%)

Query: 478 QLREVIRMFASNLTEVLMRAKAQEAISVLNETLELEVRNRTRDLQKANEKLDLMAKLDPL 537
           Q +E++  F  NL           A+S++     L + N T  L +   KL++MA  D L
Sbjct: 283 QEQELLNTFWGNL-----------ALSLVVTIGILFISNMT--LGRYQRKLEIMASTDKL 329

Query: 538 TRLGNRRMLEHQLEQTCEQTIKEVVNYGVILLDIDHFGLFNNCYGHLEGDIALMRIGNIL 597
           T   NR++ E    Q  ++      +  ++L+DIDHF   N+ YGH  GD+ L  + N+L
Sbjct: 330 TGAANRQVFEEYFHQALDKAKLSQTSISILLIDIDHFKKVNDSYGHSVGDLVLKTVTNLL 389

Query: 598 SRHAQSEHELFCRIGGEEFLLLVANRSAEEIHLLAENIRKSIEAECIEHCENPSGELLTV 657
            R      ++ CR GGEEFL+L+          LAE  R SI     E   N     +TV
Sbjct: 390 -RSQLKPQDILCRWGGEEFLVLLPEMDLSRAAELAERFRDSISQR--ELKVNGVHIAITV 446

Query: 658 SIGYAA-SRYKPREIQFDQLYAEADKALYRAKSQGRNQVI 696
           SIG A   + +P E     L   AD ALY+AK  GRNQV+
Sbjct: 447 SIGVAEYQKLEPAE----DLIKRADLALYQAKEAGRNQVV 482