Pairwise Alignments

Query, 710 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 344 a.a., GGDEF family protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  118 bits (295), Expect = 5e-31
 Identities = 69/187 (36%), Positives = 107/187 (57%), Gaps = 2/187 (1%)

Query: 507 NETLELEVRNRTRDLQKANEKLDLMAKLDPLTRLGNRRMLEHQLEQTCEQTIKEVVNYGV 566
           N  LE  ++ RT +L +AN +L+ ++  D LT +GNRR+ +  L++   +  +      +
Sbjct: 148 NRELESIIQARTYELAEANNRLEKLSNTDGLTNIGNRRLFDQMLQKEWSRGQRNNTPLSL 207

Query: 567 ILLDIDHFGLFNNCYGHLEGDIALMRIGNILSRHAQSEHELFCRIGGEEFLLLVANRSAE 626
           I+LDIDHF LFN+ YGHL GD  L  + N LS+  +   EL  R GGEEF++L+ N   +
Sbjct: 208 IMLDIDHFKLFNDHYGHLAGDDCLKMLANGLSQSGRRAGELVARYGGEEFVILLPNTDLQ 267

Query: 627 EIHLLAENIRKSIEAECIEHCENPSGELLTVSIGYAASRYKPREIQFDQLYAEADKALYR 686
                A+++ + I++  I H +   G ++TVS+G A      +     +L  +AD ALY 
Sbjct: 268 TALDTAKHVHQLIQSLAIPHIKTNLG-IVTVSVGVACLLPSDKHNAL-ELVHQADTALYL 325

Query: 687 AKSQGRN 693
           AKS GRN
Sbjct: 326 AKSAGRN 332