Pairwise Alignments

Query, 710 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 625 a.a., GGDEF domain protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  110 bits (274), Expect = 3e-28
 Identities = 75/211 (35%), Positives = 114/211 (54%), Gaps = 13/211 (6%)

Query: 495 MRAKAQEAISV---LNETLELEVRNRT-------RDLQKANEKLDLMAKLDPLTRLGNRR 544
           +R+  +EA+ V    NE LE +V+ RT       R+L + N+KL   + +D LT + NR 
Sbjct: 407 IRSAREEALKVEAETNERLEQKVQERTLELEITLRELHEVNQKLTEQSTIDSLTGVKNRS 466

Query: 545 MLEHQLEQTCEQTIKEVVNYGVILLDIDHFGLFNNCYGHLEGDIALMRIGNILSRHAQSE 604
             + +L      + ++     +++LDID F   N+ +GHL GD AL  I   L +H +  
Sbjct: 467 AFDKRLLAESRISRRQETPIALLMLDIDRFKSINDQFGHLAGDQALKLIAQTLQQHLKRP 526

Query: 605 HELFCRIGGEEFLLLVANRSAEEIHLLAENIRKSIEAECIEHCENPSGELLTVSIGYAAS 664
            +L  R GGEEF +++ N +A+    +AE+IR ++   CI          LTVSIG +A 
Sbjct: 527 TDLVSRFGGEEFAIILPNTTADGALQVAESIRDTV--SCIGLTWEGKPIPLTVSIGVSAD 584

Query: 665 RYKPREIQFDQLYAEADKALYRAKSQGRNQV 695
                E    +L  +ADKALY+AK+ GRNQV
Sbjct: 585 VIM-NEQHSTELLEQADKALYQAKNSGRNQV 614