Pairwise Alignments

Query, 710 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 605 a.a., diguanylate cyclase (RefSeq) from Shewanella sp. ANA-3

 Score =  114 bits (286), Expect = 1e-29
 Identities = 107/400 (26%), Positives = 179/400 (44%), Gaps = 31/400 (7%)

Query: 311 NRQPITEYQKQMLESFGSLLAQIYIRKKQEQN----VRMLHASMVELSRCMTVSEVCKSA 366
           N   I + Q + L+   + LA++   + QE N       L A M  L    T +      
Sbjct: 220 NDLAINKRQGRELQQQQNQLARLVDERTQELNWQSQANQLLAEM-SLQFLTTDTSQLDEC 278

Query: 367 VTFAINRMG----IDRMAVFLTDEACSYIQGTWGTDIQGN-IVDESYFRGSTHENDIVDL 421
           +  A +R+G    ++R+++    +  +  +  W  + Q N I D S    +      V  
Sbjct: 279 LADACHRIGLLFDVERVSIIEFTQRYANYRSFWSCESQANQIQDISVDSVAVLAQKFVSE 338

Query: 422 AKVYPNEVVF--KESVPIYHDCKIVGYGWTAMTMLTDKGTPIAFIAADNLIRRSPLTSQL 479
           + +    + F  +ES   Y   + VG    A   + +    +  ++   + R      Q 
Sbjct: 339 STLVIESIDFLERESPTEYQALRSVGICSIAAFAIKNANELLGLLSLSMVSRPLNWNPQK 398

Query: 480 REVIRMFASNLTEVLMRAKAQEAISVLNETLELEVRNRTRDLQKANEKLDLMAKLDPLTR 539
           + ++  FA+ L E+L+R + +  +  L + L              N +L +MA+ D LT 
Sbjct: 399 KVMLTQFAAALNELLLREEKERQMLSLQQALV-----------SVNAQLRVMAETDELTG 447

Query: 540 LGNRRMLEHQLEQTCEQTIKEVVNYGVILLDIDHFGLFNNCYGHLEGDIALMRIGNILSR 599
           L NRR   H LE   +Q  K V   G+++LD+D+F  +N+ YGHLEGD AL  +   L +
Sbjct: 448 LSNRRPFTHTLETLLQQA-KPV---GLLMLDVDYFKSYNDTYGHLEGDAALRLVAQALKQ 503

Query: 600 -HAQSEHELFCRIGGEEFLLLVANRSAEEIHLLAENIRKSIEAECIEHCENPSGELLTVS 658
                +  L  RIGGEEF +++   +  ++  +A  +   + A  I H  +P G+ +T+S
Sbjct: 504 CDVLPQDSLLARIGGEEFAIILEQITPIQLEAIANQLCYRVAALDIPHRSSPKGK-ITLS 562

Query: 659 IG--YAASRYKPREIQFDQLYAEADKALYRAKSQGRNQVI 696
           IG  Y       R     ++   AD  LYRAK QGRN V+
Sbjct: 563 IGGVYLPLDTSVRGFTLSEVLRRADICLYRAKEQGRNTVV 602