Pairwise Alignments

Query, 160 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 171 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  147 bits (372), Expect = 7e-41
 Identities = 75/157 (47%), Positives = 98/157 (62%), Gaps = 4/157 (2%)

Query: 6   AVLLLLLIFPNL----SYAQVDLVKVDKSKRRMYLLQGNEIIREYRIALGKSPKGHKQQE 61
           A+ L  LI P +       +VDLV + KS+  M LL+  +++++YRIA+G  P GHK  E
Sbjct: 13  AITLAALISPQVLASSGIGKVDLVVITKSESNMALLRDGKVLKQYRIAMGDLPTGHKLTE 72

Query: 62  GDQRTPEGHYLLDFIIEDSSFYRSIHISYPNTRDLQLAQLRGVNPGGDIKIHGLKNGDER 121
           GDQRTP+G Y+LD+   DS++Y+SIHISYPN  D   A+  G+ PGG I IHG       
Sbjct: 73  GDQRTPQGRYILDYKKSDSAYYKSIHISYPNEEDKLRAKALGIRPGGMIMIHGQNPRSPL 132

Query: 122 EPGFVQSFDWTNGCIAITNQEMDEFLSLVQPGVPILI 158
            P   Q ++WT+GCIAITN EMDE    V  G PI I
Sbjct: 133 PPEQAQQYNWTDGCIAITNAEMDEVWKAVDEGTPIEI 169