Pairwise Alignments

Query, 411 a.a., transposase from Vibrio cholerae E7946 ATCC 55056

Subject, 418 a.a., aromatic amino acid transporter (RefSeq) from Shewanella loihica PV-4

 Score =  323 bits (828), Expect = 6e-93
 Identities = 175/403 (43%), Positives = 249/403 (61%), Gaps = 7/403 (1%)

Query: 13  SLFGGACIIASVCVGAGMLGLPSAGAGAWTLWSMLALALTMAVMTLSGWMLLEAFKHYDL 72
           SL GGA IIA   VGAGM  LP  GAG W  +S+L +      M +SG +LLE   HY+ 
Sbjct: 16  SLLGGAMIIAGTAVGAGMFSLPVVGAGMWFSYSVLMMLGVWFCMLVSGLLLLETNLHYEP 75

Query: 73  RVSFNTVTKDMLGSHINRFNNLTVYFVGGILLYAYITSSGLILQDLL-----HINSKIAS 127
             SF+T+T+D LG+     N L++ FV  IL YAYI+  G I+   L      +    A 
Sbjct: 76  GASFDTLTRDTLGNFWRIVNGLSIAFVLYILAYAYISGGGSIVNHSLSSLGVELPQSFAG 135

Query: 128 ILFVAVFSAFVWHSTRAVDRISVILIVFMVLSFIFGVSGLAINVKTSILFDTLNQSGEYA 187
           ++F    +  V+ ST+AVDRI+ I++  M+++F   +  L I V+ + LF   +    Y 
Sbjct: 136 LVFAVGLAIIVFISTKAVDRITTIMLGGMIITFFLAIGNLLIEVEPAKLF-VPDGEANYL 194

Query: 188 PYAMAMLPVALTSFGYHHSVSSMRAYYGEERKAKY-AILGGTVIALSLYALWLFSIFGNL 246
           PY +A +P  L SFGYH +V S+  YYG++      AI  GT+IA  +Y  WL +  GN+
Sbjct: 195 PYMLAAIPFGLVSFGYHGNVPSLVKYYGKDPGTIVKAITLGTLIAFVIYLCWLVATMGNI 254

Query: 247 PRADFAPVIQQGGNVDVLLKALGSVVESEKVSQAINAFSMAAILSSFIGVGLGVFDFLAD 306
            R+ F  VI QGGN+ VL+ AL  V+ S+ ++  +  F+  A+ SSF+GV LG+FD+LAD
Sbjct: 255 TRSGFVEVIAQGGNMGVLVAALSDVMASDWLTTMLTLFANLAVASSFLGVTLGLFDYLAD 314

Query: 307 LFQFSNCKQGRTKTWLVTFLPPLILSLLFPFGFIIAIGYAGAAATIWACIIPVLLARKSR 366
           LF F   + GR KT  VTFLPP +L LLFP GF+IAIG+A  AAT+WA I+P L+A ++R
Sbjct: 315 LFGFDESRTGRLKTAAVTFLPPTVLGLLFPNGFLIAIGFAALAATVWAAIVPALMAYRAR 374

Query: 367 TLANGAQGFVVPGGNLALGLVLIFGVLTAVFHMMAMANLLPAF 409
            +   +Q F VPGG + + +V+ +G+LTA  H++AMA+LLP +
Sbjct: 375 QMFPDSQSFRVPGGTVVIAIVIFYGLLTAACHLLAMADLLPMY 417