Pairwise Alignments

Query, 411 a.a., transposase from Vibrio cholerae E7946 ATCC 55056

Subject, 395 a.a., aromatic amino acid permease (RefSeq) from Shewanella loihica PV-4

 Score =  160 bits (404), Expect = 8e-44
 Identities = 114/396 (28%), Positives = 192/396 (48%), Gaps = 27/396 (6%)

Query: 14  LFGGACIIASVCVGAGMLGLPSAGAGAWTLWSMLALALTMAVMTLSGWMLLEAFKHYDLR 73
           + G   I+A   +G GML LP A A   T+ ++L L     V   +  ++LE      + 
Sbjct: 1   MLGSIAIVAGTAIGGGMLALPLATASLGTIPALLLLVAIWGVSIYTSLLMLEINLRAGVG 60

Query: 74  VSFNTVTKDMLG---------SHINRFNNLT-VYFVGGI-LLYAYITSSGLILQDLLHIN 122
           ++ + +T   LG         S ++    LT VY +GG  LL +     G+       +N
Sbjct: 61  LNVHAITGKTLGKVGQLIQGGSFLSLLFALTMVYLMGGSSLLESRFEPLGI------KVN 114

Query: 123 SKIASILFVAVFSAFVWHSTRAVDRISVILIVFMVLSFIFGVSGLAINVKTSILF----D 178
            + A ++F  VF  F+      +D++S +L   MV  F+  V  L   V  S +      
Sbjct: 115 HEAAVLIFTLVFGGFIAIGVSWIDKVSRVLFSAMVALFVIVVLFLLPEVSPSYILRESAT 174

Query: 179 TLNQSGEYAPYAMAMLPVALTSFGYHHSVSSMRAYY-GEERKAKYAILGGTVIALSLYAL 237
            L   GE     +A +PV  TSFG+H  ++++  Y  G+    +  ++ G+ I L  Y L
Sbjct: 175 ELVSKGELGNLWLAAIPVVFTSFGFHVCIATIVRYLDGDAMSLRKVLMIGSTIPLVCYIL 234

Query: 238 WLFSIFGNLPRADFAPVIQQGGNVDVLLKALGSVVESEKVSQAINAFSMAAILSSFIGVG 297
           WL    G +  A    V    G++  L+ AL  +  S+ + Q I+ F+  A+++SF+GV 
Sbjct: 235 WLMVTLGTVGGAT---VYGFEGSLPKLVSALQGIAHSDILRQCIDLFANLALITSFLGVT 291

Query: 298 LGVFDFLADLFQFSNCKQGRTKTWLVTFLPPLILSLLFPFGFIIAIGYAGAAATIWACII 357
           + +FD++A+L +  +   GR +TWL+TF+PPL+ +L +P GFI  +G+A     +    +
Sbjct: 292 MSLFDYIAELTRARDNLLGRLQTWLITFVPPLLCALYYPDGFIKVLGFAALPLVVMIIFL 351

Query: 358 PVLLARKSRTLANGAQGFVVPGGNLALGLVLIFGVL 393
           P+ +A   R    G  G+ V GG  AL    + G++
Sbjct: 352 PIAMALGQRKQNLG--GYQVSGGQFALAASALVGLV 385