Pairwise Alignments

Query, 411 a.a., transposase from Vibrio cholerae E7946 ATCC 55056

Subject, 395 a.a., tyrosine-specific transport protein, putative (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  160 bits (405), Expect = 6e-44
 Identities = 107/387 (27%), Positives = 189/387 (48%), Gaps = 13/387 (3%)

Query: 14  LFGGACIIASVCVGAGMLGLPSAGAGAWTLWSMLALALTMAVMTLSGWMLLEAFKHYDLR 73
           + G   I+A   +GAGML LP A A    + ++L + +   +   +  ++LE      + 
Sbjct: 5   MLGSIAIVAGTAIGAGMLALPLATAALGMVPAILLMVVIWGLSAYTSLLMLEINLRSGVG 64

Query: 74  VSFNTVTKDMLGSHINRFNNLTVYFVGGILLYAYITSSGLIL----QDLLHI--NSKIAS 127
            + + +T  +LG         +   +   L  AY+T    +L    Q++  I  ++++A 
Sbjct: 65  DNVHAITGKLLGKKGQIVQGASFLSLLVALTAAYLTGGSSLLVLKAQNMFDIVLDNQLAV 124

Query: 128 ILFVAVFSAFVWHSTRAVDRISVILIVFMVLSFIFGVSGLAINVKTSILFDTLNQSGEYA 187
           +LF  V   F       VD++S  L   M+L  I  V  L   V  S +  +       +
Sbjct: 125 VLFTIVLGGFAALGVAWVDKVSRFLFSLMILLLIVVVLFLLPEVSISTIATSAVAQSLTS 184

Query: 188 PYAMAMLPVALTSFGYHHSVSSMRAYY-GEERKAKYAILGGTVIALSLYALWLFSIFGNL 246
            + MA +PV  TSFG+H  ++++  Y  G+    +  +L G+ I L+ Y  WL    G +
Sbjct: 185 SW-MAAIPVVFTSFGFHVCIATLVRYLDGDTVSLRKVLLIGSTIPLACYIFWLLVTLGTV 243

Query: 247 PRADFAPVIQQGGNVDVLLKALGSVVESEKVSQAINAFSMAAILSSFIGVGLGVFDFLAD 306
              +        G++  L+ AL  +  +  +S+ I+ F+  A+++SF+GV L ++DF+A+
Sbjct: 244 GGNEINGF---NGSLPALISALQEIAHTPLISKCISLFADLALITSFLGVTLSLYDFVAE 300

Query: 307 LFQFSNCKQGRTKTWLVTFLPPLILSLLFPFGFIIAIGYAGAAATIWACIIPVLLARKSR 366
           L +      GR +TWL+TF+PPL+ +L  P GF+  +G+A     +    +P+ +A + R
Sbjct: 301 LTRAKKTFVGRAQTWLLTFVPPLLCALYVPEGFVAVLGFAAVPLVVMIIFLPIAMALRQR 360

Query: 367 TLANGAQGFVVPGGNLALGLVLIFGVL 393
            +    QG+ V GG  ALGL  I G +
Sbjct: 361 QIQ--PQGYQVVGGTFALGLAGILGAI 385