Pairwise Alignments

Query, 411 a.a., transposase from Vibrio cholerae E7946 ATCC 55056

Subject, 419 a.a., tryptophan-specific transport protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  303 bits (775), Expect = 8e-87
 Identities = 170/407 (41%), Positives = 250/407 (61%), Gaps = 9/407 (2%)

Query: 11  QPSLFGGACIIASVCVGAGMLGLPSAGAGAWTLWSMLALALTMAVMTLSGWMLLEAFKHY 70
           +P +FGG  IIA   +GAGML LP+  AG W  WS+  + L   VM LS   LLE   H+
Sbjct: 15  RPGVFGGTMIIAGTSIGAGMLALPTISAGMWFGWSLAVMLLAWLVMLLSSQALLEVNLHF 74

Query: 71  DLRVSFNTVTKDMLGSHINRFNNLTVYFVGGILLYAYITSSGLILQDLL-----HINSKI 125
           +   SF+T+ ++ LG   +  N   V FV  IL+YAY++  G I++  L     +  SK+
Sbjct: 75  EPGASFHTLVRETLGPGWSVINGAAVAFVLYILVYAYVSGGGSIMRHTLLAVSGYEPSKL 134

Query: 126 ASIL-FVAVFSAFVWHSTRAVDRISVILIVFMVLSFIFGVSGLAINVKTSILFDTLNQSG 184
           A+ L F  + +A VW ST  VDR+SVI++  MV+SFI  +SG+  +++  +LFD   + G
Sbjct: 135 AAGLSFALLLAACVWWSTWIVDRLSVIMMGGMVVSFILSMSGMLSDIRADVLFDAGGEGG 194

Query: 185 EYAPYAMAMLPVALTSFGYHHSVSSMRAYYGEE-RKAKYAILGGTVIALSLYALWLFSIF 243
             A +    L   LTSF +H SV S+  Y+G         ++GGT IAL  Y LW+ +  
Sbjct: 195 S-ALFVWGALSTYLTSFCFHASVPSLVKYFGRRPADINRCLVGGTGIALVCYLLWIVACD 253

Query: 244 GNLPRADFAPVIQQGGNVDVLLKALGSVVESEKVSQAINAFSMAAILSSFIGVGLGVFDF 303
           G +PRA+F  VI  GGNV  L++A GS + S  + + + AFS  A+ +SF+G GLG+FD+
Sbjct: 254 GTIPRAEFRDVIAAGGNVGDLVRAAGSNLNSGFILRMLEAFSALAVATSFLGAGLGLFDY 313

Query: 304 LADLFQFSNCKQGRTKTWLVTFLPPLILSLLFPFGFIIAIGYAGAAATIWACIIPVLLAR 363
           +ADL +F + + GRTKT LVTF PP +  LL+P GF++AIG+AG AAT+W+ ++P L+ R
Sbjct: 314 IADLCRFDDTRAGRTKTTLVTFGPPTVGGLLWPDGFLLAIGWAGLAATVWSVVVPALMLR 373

Query: 364 KSRTLANGAQGFVVPGGNLALGLVLIFGVLTAVFHMMAMANLLPAFK 410
            SR     A G+ V GG+L +  +L FG++TAV H + +  +LP ++
Sbjct: 374 ASRA-TRPAPGYRVGGGSLTVPALLAFGLVTAVCHTLFVFGVLPMYR 419