Pairwise Alignments

Query, 411 a.a., transposase from Vibrio cholerae E7946 ATCC 55056

Subject, 425 a.a., tryptophan-specific transport protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  318 bits (815), Expect = 2e-91
 Identities = 170/407 (41%), Positives = 246/407 (60%), Gaps = 8/407 (1%)

Query: 10  KQPSLFGGACIIASVCVGAGMLGLPSAGAGAWTLWSMLALALTMAVMTLSGWMLLEAFKH 69
           K PS+ GGA IIA   +GAGM  LPS  AG W  +S+  L  T   M  SG M+LEA  +
Sbjct: 18  KNPSVLGGAMIIAGTTIGAGMFSLPSVSAGMWFFYSLFVLFGTWLCMCHSGLMILEANLN 77

Query: 70  YDLRVSFNTVTKDMLGSHINRFNNLTVYFVGGILLYAYITSSGLILQDL------LHINS 123
           Y    SF+ + KD L   +   N+L+V FV  IL YAYI+  G I+         + +  
Sbjct: 78  YPAGTSFDNIAKDCLARPVRLLNSLSVAFVLYILTYAYISGGGSIVAHTVKAAVGIDVPM 137

Query: 124 KIASILFVAVFSAFVWHSTRAVDRISVILIVFMVLSFIFGVSGLAINVKTSILFDTLNQS 183
           K+   LF  V +  VW STRAVDRIS I++  M+L+F   VSGL  NV+ ++LFDT + S
Sbjct: 138 KLGGFLFALVLAFVVWLSTRAVDRISTIMLGGMILTFFSSVSGLMFNVQPAVLFDTGDTS 197

Query: 184 GEYAPYAMAMLPVALTSFGYHHSVSSMRAYYGEERKA-KYAILGGTVIALSLYALWLFSI 242
             Y+P+ +A LP  LTSFGYH +V  +  YY ++ KA    I+ G+ + L LY  W  S+
Sbjct: 198 APYSPFILATLPYFLTSFGYHGNVPGLVKYYNKDPKAVAKTIIYGSFLGLILYVCWQLSV 257

Query: 243 FGNLPRADFAPVIQQGGNVDVLLKALGSVVESEKVSQAINAFSMAAILSSFIGVGLGVFD 302
            GN+PR +F  ++ +GGN+ +L+ AL  V  S  +   +  FS  A+ +SF+GV LG+FD
Sbjct: 258 LGNIPREEFLDIVAKGGNMGILVGALSKVTGSTNLDYLLQVFSHLAVATSFLGVTLGLFD 317

Query: 303 FLADLFQFSNCKQGRTKTWLVTFLPPLILSLLFPFGFIIAIGYAGAAATIWACIIPVLLA 362
            +AD   F + + GRTKT +VTF+PP I  L +P GFI+AIG+AG AAT++A I+P ++A
Sbjct: 318 CIADTLGFDDSRLGRTKTAIVTFVPPAIGGLFYPDGFIMAIGFAGLAATVFAVIVPAMMA 377

Query: 363 RKSRTLANGAQGFVVPGGNLALGLVLIFGVLTAVFHMMAMANLLPAF 409
             +R    G   +  PGGN+ L + + +G+  A+ H++ M ++LP +
Sbjct: 378 LATRR-KFGNTTYRAPGGNVMLYVTIAYGITVAICHVLTMFDMLPVY 423