Pairwise Alignments

Query, 411 a.a., transposase from Vibrio cholerae E7946 ATCC 55056

Subject, 418 a.a., aromatic amino acid transporter (RefSeq) from Shewanella sp. ANA-3

 Score =  327 bits (839), Expect = 3e-94
 Identities = 184/404 (45%), Positives = 251/404 (62%), Gaps = 9/404 (2%)

Query: 13  SLFGGACIIASVCVGAGMLGLPSAGAGAWTLWSMLALALTMAVMTLSGWMLLEAFKHYDL 72
           SL GGA IIA   VGAGM  LP  GAG W  +S+L L      M +SG +LLE   H++ 
Sbjct: 16  SLLGGAMIIAGTTVGAGMFSLPVVGAGMWFGYSVLMLLGIWFCMLMSGLLLLETNLHFEP 75

Query: 73  RVSFNTVTKDMLGSHINRFNNLTVYFVGGILLYAYITSSGLILQDLLH-----INSKIAS 127
             SF+T+TK+ LG      N +++ FV  IL YAYI+  G I+   L      +   +A 
Sbjct: 76  GASFDTLTKETLGQFWRIVNGVSIAFVLYILTYAYISGGGSIVNHSLQGMGIELPQSVAG 135

Query: 128 ILFVAVFSAFVWHSTRAVDRISVILIVFMVLSFIFGVSGLAINVK-TSILFDTLNQSGEY 186
           ++F  V +  V  ST+AVDRI+ I++  M+++F   +  L I +  T +L    NQS  +
Sbjct: 136 LVFAVVLACIVLISTKAVDRITTIMLGGMIITFFLAIGNLLIEIDVTKLLEPDGNQS--F 193

Query: 187 APYAMAMLPVALTSFGYHHSVSSMRAYYGEERKAKY-AILGGTVIALSLYALWLFSIFGN 245
            PY  A LP  L SFGYH +V S+  YYG++      AI  GT IAL +YA WL +  GN
Sbjct: 194 MPYLWAALPFGLASFGYHGNVPSLVKYYGKDSSTIIKAIFVGTFIALIIYACWLVATMGN 253

Query: 246 LPRADFAPVIQQGGNVDVLLKALGSVVESEKVSQAINAFSMAAILSSFIGVGLGVFDFLA 305
           +PR+ F+ +I QGGN+ VL+ AL  V+ES  ++  +  F+  A+ SSF+GV LG+FD+LA
Sbjct: 254 IPRSQFSEIIAQGGNMGVLVGALSKVMESSWLNSMLTLFANLAVASSFLGVTLGLFDYLA 313

Query: 306 DLFQFSNCKQGRTKTWLVTFLPPLILSLLFPFGFIIAIGYAGAAATIWACIIPVLLARKS 365
           DLF F + + GR KT +VTF+PP IL LLFP GF+IAIG+A  AAT+WA I+P L+A KS
Sbjct: 314 DLFGFDDTRSGRMKTAIVTFVPPTILGLLFPDGFLIAIGFAALAATVWAVIVPALMAYKS 373

Query: 366 RTLANGAQGFVVPGGNLALGLVLIFGVLTAVFHMMAMANLLPAF 409
           R      QGF V GG   + LV+++GV+T   H++AMANLLP F
Sbjct: 374 RQQFPNHQGFRVFGGTPLIILVVLYGVVTGACHLLAMANLLPQF 417