Pairwise Alignments

Query, 411 a.a., transposase from Vibrio cholerae E7946 ATCC 55056

Subject, 391 a.a., aromatic amino acid permease (RefSeq) from Shewanella sp. ANA-3

 Score =  159 bits (402), Expect = 1e-43
 Identities = 107/388 (27%), Positives = 193/388 (49%), Gaps = 15/388 (3%)

Query: 14  LFGGACIIASVCVGAGMLGLPSAGAGAWTLWSMLALALTMAVMTLSGWMLLEAFKHYDLR 73
           + G   I+A   +GAGML LP A A    + ++L + +   +   +  ++LE      + 
Sbjct: 1   MLGSIAIVAGTAIGAGMLALPLATAALGMVPAILLMVVIWGLSAYTSLLMLEINLRSGVG 60

Query: 74  VSFNTVTKDMLGSHINRFNNLTVYFVGGILLYAYIT--SSGLILQ-----DLLHINSKIA 126
            + + +T  +LG         +   +   L  AY+T  SS L+L+     DL+ +++++A
Sbjct: 61  DNVHAITGKLLGKKGQMVQGASFLSLLFALTAAYLTGGSSLLVLKAKNMFDLV-LDNQLA 119

Query: 127 SILFVAVFSAFVWHSTRAVDRISVILIVFMVLSFIFGVSGLAINVKTSILFDTLNQSGEY 186
            +LF  V   F       VD+ S  L   M+L  I  V  L   V  S +  +       
Sbjct: 120 VVLFTLVLGGFAALGVAWVDKASRFLFSLMILLLIVVVLFLLPEVSISSMATSAVAESMT 179

Query: 187 APYAMAMLPVALTSFGYHHSVSSMRAYY-GEERKAKYAILGGTVIALSLYALWLFSIFGN 245
           + + MA +PV  TSFG+H  ++++  Y  G+    +  +L G+ I L+ Y  WL    G 
Sbjct: 180 SSW-MAAIPVVFTSFGFHVCIATLVRYLDGDAVSLRKVLLIGSTIPLACYIFWLLVTLGT 238

Query: 246 LPRADFAPVIQQGGNVDVLLKALGSVVESEKVSQAINAFSMAAILSSFIGVGLGVFDFLA 305
           +   + +      G++  L+ AL  +  +  +S+ I+ F+  A+++SF+GV L ++DF+A
Sbjct: 239 VGGTEISSF---NGSLPALISALQEIAHTPWISKCISLFADLALITSFLGVTLSLYDFVA 295

Query: 306 DLFQFSNCKQGRTKTWLVTFLPPLILSLLFPFGFIIAIGYAGAAATIWACIIPVLLARKS 365
           +L +      GR +TWL+TF+PPL+ +L  P GF+  +G+A     +    +P+++A + 
Sbjct: 296 ELTRAKKTFLGRAQTWLLTFVPPLLCALYVPEGFVAVLGFAAVPLVVMIIFLPIVMALRQ 355

Query: 366 RTLANGAQGFVVPGGNLALGLVLIFGVL 393
           R      QG+ V GG  +LG+  + G +
Sbjct: 356 RQAT--PQGYQVSGGTFSLGIAGLLGAV 381