Pairwise Alignments

Query, 313 a.a., universal stress protein from Vibrio cholerae E7946 ATCC 55056

Subject, 286 a.a., Universal stress protein UspA and related nucleotide-binding proteins from Pseudomonas stutzeri RCH2

 Score = 79.7 bits (195), Expect = 7e-20
 Identities = 53/188 (28%), Positives = 92/188 (48%), Gaps = 16/188 (8%)

Query: 127 DMTLLRKCPCPVWLHRPLAKPKANRRVAVAIDPITTTEQQKALALRLLELSRSIANTCDS 186
           D  LLR CPCPV + +  A P     +  A+D   +  + + L   ++     IA+  D 
Sbjct: 109 DWKLLRYCPCPVLMVKT-ANPWTGGSILAAVDVGNSDLEHRTLHATIVNHGFEIASLADG 167

Query: 187 RLHIVSCWEYYLENYLHDQVWIQVEQQ--QIAEEIAQAKIRHEQALRQLIDESGITGELV 244
           +LH++S          H    +       Q+ E I   + R+ +A +Q  +E  I  +  
Sbjct: 168 KLHVISA---------HPSAMLSAADPAFQLKETI---EARYREACKQFQEEFDIP-DAQ 214

Query: 245 IHHLHGKPDELIPEWVTQENIDILVMGTLARTGIAGFVIGNTAENIVQSIECSLVALKPE 304
           +H   G  D LIP    Q    + V+GT+ARTG +G ++GNTAE ++ ++E  ++ LKP+
Sbjct: 215 LHIEEGPADALIPRVCHQLKAVVTVIGTIARTGFSGALMGNTAEVVLDTLESDVLVLKPD 274

Query: 305 GFVSPIKN 312
             +  +++
Sbjct: 275 DIIDHLED 282



 Score = 26.6 bits (57), Expect = 7e-04
 Identities = 17/46 (36%), Positives = 27/46 (58%), Gaps = 7/46 (15%)

Query: 148 KANRRVAVAIDPITTTEQQKALALRLLELSRSIANTCDSRLHIVSC 193
           +A R + V IDP     Q + LAL+    +R I++   SRLH+++C
Sbjct: 2   QAIRCILVVIDP----NQPQELALKR---ARLISSVSQSRLHLLTC 40